SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene984

Length: 868 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene984

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	aprataxin, putative; K10863 aprataxin [EC:3.-.-.-]	-	-	7.0e-37	67%
FL-Next	sp=Transcription factor bHLH140; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	57%
Blast2go	basic helix-loop-helix family protein	-	-	2.80932e-37	76%

Source	ECs	Term	Type	e value	Identity
Blast2go	Adenylylsulfatase.	EC:3.6.2.1	-	2.80932e-37	76%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Sulfur metabolism	00920		2.80932e-37	76%
Blast2go	Metabolic pathways	01100		2.80932e-37	76%

Source	ECs	Term	Type	e value	Identity
AutoFact		EC:3.-.-.-	-	7.0e-37	67%

Source	GOs	Term	Type	e value	Identity
Blast2go	sulfur compound metabolic process	GO:0006790	Biological Process	2.80932e-37	76%
Blast2go	purine ribonucleotide metabolic process	GO:0009150	Biological Process	2.80932e-37	76%
Blast2go	adenylylsulfatase activity	GO:0047627	Molecular Function	2.80932e-37	76%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Histidine triad-like motif	IPR011146	-	2.80932e-37	76%
Blast2go	Histidine triad, conserved site	IPR019808	-	2.80932e-37	76%

Full-Lengther Next Prediction

SNPs (tot: 23)

Position	A %	C %	G %	T %	Probability
323	84		15		0.999986
377	86			13	0.999973
378		13		86	0.999973
381		86	13		0.999973
383		13		86	0.999973
386		86		13	0.999973
387		86	13		0.999973
394			85	14	0.999981
395		14	85		0.999981
397	85	14			0.999981
399	14		85		0.999981
400	85		14		0.999981
656	14		85		0.993533
661		16		83	0.994512
665		16		83	0.994512
682	14	85			0.993533
685		85	14		0.993533
686	85		14		0.993533
713		14		85	0.993533
764		16		83	0.994512
771	20			80	0.995493
787	20	80			0.995493
788		20		80	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain