SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene122

Length: 2039 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

>sp_v1.1_unigene122
CAGTGTCCACTCAGCCGAATCTTATTTTTGTTGAACTTCAAACACGAACTAGGTTGAGTTAAGGGATAACAGTACCAGTAACAGCGGCGAAGGGCGGGAAGCGCATGCAGCCATGGCGATGGAAGAGAATAACCATAACAGCAACAGTATCGTCAACATCACTGCTAGTAGAGACAGTGTCGTTTTGATTCTTGATTTCGGCTCCCAGTATACCCATTTGATTACTCGCCGAATCCGGCAGCTTGCTGTATGCTCTGTGTGTCTCTCGGGCACTTCGCCCCTGTCGGCAATGGCGGCCCTCAATCCCTCGGTCATCATCCTCTCGGGGGGTCCTCACAGCGTTCACGAGGAGGGCGCCCCCTCACTGCCTGACGGATTCTTTGACTATGTGTGGGAGAAGGGGATTCATGTTCTGGGCATCTGCTATGGTCTGCAGCTCATCGTCAAGATGATGGGGGGTGAGGTCAAGCCTGCCGAATCCCAGGAGTACGGGAGAATGGAGGTCCGCATGCACGAGGGGTCGAAGCTCTATGGGGACATCTTCGTCGGAGGGACGCAGAATGTGTGGATGAGCCATGGGGACGAGGTCGTCAGATTGCCCGAGGGCTTCGTGGTCGTGGCCACAAGTCTGCAGAATGCCATAGCCGCCATTGAAAATCCCCACAAGGGATTATACGGCTTTCAGTACCATCCGGAGGTGACCCATTCAGTGCTTGGAATGGAGACGCTACGCCATTTTCTTTTCAGTGTTTGTGGCATCAAAGCTGATTGGAAACTTGAGGATGTGCTAGAAGAGCAAATTCAAACAGTGAGAGGAATGGTTGGACCAGTGGATCATGCCATCTGTGCATTGTCAGGTGGTGTGGACTCCACAGTTGCAGCGACTCTTGTACACAGAGCACTTGGAGACAGGCTTCACTGTGTTTTTGTGGACAACGGACTTTTGAGGTACAAGGAGAGAGAGCGTGTAATGGCCACATTTAAAAGTGATCTACATTTGCCTGTGACTTGTATTGATGCAACAGAACGTTTTCTTAATAAACTCAAAGGAGTAACAGACCCTGAAAGAAAACGGAAAATTATTGGAGGGGAATTTATCCACATTTTTGATGAATTCTCTTTAGATTTGGAAAAAAAACTGGGAAGGAAGCCAATGTTCTTGGTCCAGGGTACTCTGTATCCTGATGTAATTGAGTCGTGTCCACCACCTGGGAGTGGGAGAAATCACTCTCACACAATCAAGAGCCATCATAATGTTGGGGGGCTTCCAGAGGAAATGAATCTGAAACTTATTGAGCCTCTTAAGTGGCTTTTCAAAGATGAGGTAAGAAAGCTAGGAGCAATTTTGAGTGTTCCTCAAGGGTTTCTTAAGAGGCATCCATTCCCTGGTCCTGGCTTAGCTGTACGTATTTTGGGTGATGTCACTGAAGGAAATGCCTTGGATACCATACGCCTGGTTGATGAGATCTTTATCAATTCAATCAAGGATGCTGGACTATATGATTCAATTTGGCAAGCTTTCGCAGTTTTTTTGCCAGTAAAGACTGTTGGTGTGCAAGGTGATAAGAGGACTCACTCACATGCAGTTGCATTGAGAGCAATCACTAGTGAGGATGGAATGACTGCAGACTGGTATCAATTTGATCCCAAGTTCCTTGCAGAGGTTTCTGCGAAGATTTGCAACAGTGTTCGTGGAGTAAATAGAATAGTTTATGACATAACCTCAAAACCTCCATCAACTGTAGAGTGGGAGTGATGTGCATAATACATAAATTGCATGATTTTGTATTATTTATTTGTGGTGAACCACAATTAAATAATACTATTTCCTGGATATCTTCATGGGAAAGGAATTTTTTCAGGAAACTTTTTGTAAAAATGTCGGCGTCCGAGTTTTCTACTGCTCCATTGTCAATACGTAGTAATGTATTTTGATTTTTTAAGGCTTTATTTAGTCTCAAAGTTCGTGCTTTATAAGAGAAACAAGCATACTAATGATCTAATTTTTTAACTTTATATCATTAGATTTTCAACCAAAG

Ace file of the UniGene sp_v1.1_unigene122

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	umc2770; LOC100383569; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]	-	-	72%
FL-Next	sp=Anthranilate synthase component II; Porphyra purpurea. Plastid; Chloroplast.	-	-	26%
Blast2go	protein	-	-	82%

Source	ECs	Term	Type	e value	Identity
AutoFact	GMP synthase (glutamine-hydrolyzing).	EC:6.3.5.2	-	0.0	72%

Source	KEGGs	Term	Identity
AutoFact	Purine metabolism	00230	72%
AutoFact	Drug metabolism - other enzymes	00983	72%
AutoFact	Biosynthesis of alkaloids derived from histidine and purine	01065	72%
AutoFact	Metabolic pathways	01100	72%

Source	GOs	Term	Type	e value	Identity
Blast2go	catalytic activity	GO:0003824	Molecular Function	0.0	82%

Source	InterPros	Term	Type	Identity
Blast2go	GMP synthase, C-terminal	IPR001674	-	82%
Blast2go	GMP synthase, N-terminal	IPR004739	-	82%
Blast2go	Rossmann-like alpha/beta/alpha sandwich fold	IPR014729	-	82%
Blast2go	Glutamine amidotransferase type 1	IPR017926	-	82%
Blast2go	GMP synthase	IPR022955	-	82%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: sp_plants

Fln subject: P51362

Fln msg: your sequence is longer than subject: 548 - 189

Fln protein: MAMEENNHNSNSIVNITASRDSVVLILDFGSQYTHLITRRIRQLAVCSVCLSGTSPLSAMAALNPSVIILSGGPHSVHEEGAPSLPDGFFDYVWEKGIHVLGICYGLQLIVKMMGGEVKPAESQEYGRMEVRMHEGSKLYGDIFVGGTQNVWMSHGDEVVRLPEGFVVVATSLQNAIAAIENPHKGLYGFQYHPEVTHSVLGMETLRHFLFSVCGIKADWKLEDVLEEQIQTVRGMVGPVDHAICALSGGVDSTVAATLVHRALGDRLHCVFVDNGLLRYKERERVMATFKSDLHLPVTCIDATERFLNKLKGVTDPERKRKIIGGEFIHIFDEFSLDLEKKLGRKPMFLVQGTLYPDVIESCPPPGSGRNHSHTIKSHHNVGGLPEEMNLKLIEPLKWLFKDEVRKLGAILSVPQGFLKRHPFPGPGLAVRILGDVTEGNALDTIRLVDEIFINSIKDAGLYDSIWQAFAVFLPVKTVGVQGDKRTHSHAVALRAITSEDGMTADWYQFDPKFLAEVSAKICNSVRGVNRIVYDITSKPPSTVEWE*

Protein Length: 549

Fln nts: CAGTGTCCACTCAGCCGAATCTTATTTTTGTTGAACTTCAAACACGAACTAGGTTGAGTTAAGGGATAACAGTACCAGTAACAGCGGCGAAGGGCGGGAAGCGCATGCAGCC_-_ATGGCGATGGAAGAGAATAACCATAACAGCAACAGTATCGTCAACATCACTGCTAGTAGAGACAGTGTCGTTTTGATTCTTGATTTCGGCTCCCAGTATACCCATTTGATTACTCGCCGAATCCGGCAGCTTGCTGTATGCTCTGTGTGTCTCTCGGGCACTTCGCCCCTGTCGGCAATGGCGGCCCTCAATCCCTCGGTCATCATCCTCTCGGGGGGTCCTCACAGCGTTCACGAGGAGGGCGCCCCCTCACTGCCTGACGGATTCTTTGACTATGTGTGGGAGAAGGGGATTCATGTTCTGGGCATCTGCTATGGTCTGCAGCTCATCGTCAAGATGATGGGGGGTGAGGTCAAGCCTGCCGAATCCCAGGAGTACGGGAGAATGGAGGTCCGCATGCACGAGGGGTCGAAGCTCTATGGGGACATCTTCGTCGGAGGGACGCAGAATGTGTGGATGAGCCATGGGGACGAGGTCGTCAGATTGCCCGAGGGCTTCGTGGTCGTGGCCACAAGTCTGCAGAATGCCATAGCCGCCATTGAAAATCCCCACAAGGGATTATACGGCTTTCAGTACCATCCGGAGGTGACCCATTCAGTGCTTGGAATGGAGACGCTACGCCATTTTCTTTTCAGTGTTTGTGGCATCAAAGCTGATTGGAAACTTGAGGATGTGCTAGAAGAGCAAATTCAAACAGTGAGAGGAATGGTTGGACCAGTGGATCATGCCATCTGTGCATTGTCAGGTGGTGTGGACTCCACAGTTGCAGCGACTCTTGTACACAGAGCACTTGGAGACAGGCTTCACTGTGTTTTTGTGGACAACGGACTTTTGAGGTACAAGGAGAGAGAGCGTGTAATGGCCACATTTAAAAGTGATCTACATTTGCCTGTGACTTGTATTGATGCAACAGAACGTTTTCTTAATAAACTCAAAGGAGTAACAGACCCTGAAAGAAAACGGAAAATTATTGGAGGGGAATTTATCCACATTTTTGATGAATTCTCTTTAGATTTGGAAAAAAAACTGGGAAGGAAGCCAATGTTCTTGGTCCAGGGTACTCTGTATCCTGATGTAATTGAGTCGTGTCCACCACCTGGGAGTGGGAGAAATCACTCTCACACAATCAAGAGCCATCATAATGTTGGGGGGCTTCCAGAGGAAATGAATCTGAAACTTATTGAGCCTCTTAAGTGGCTTTTCAAAGATGAGGTAAGAAAGCTAGGAGCAATTTTGAGTGTTCCTCAAGGGTTTCTTAAGAGGCATCCATTCCCTGGTCCTGGCTTAGCTGTACGTATTTTGGGTGATGTCACTGAAGGAAATGCCTTGGATACCATACGCCTGGTTGATGAGATCTTTATCAATTCAATCAAGGATGCTGGACTATATGATTCAATTTGGCAAGCTTTCGCAGTTTTTTTGCCAGTAAAGACTGTTGGTGTGCAAGGTGATAAGAGGACTCACTCACATGCAGTTGCATTGAGAGCAATCACTAGTGAGGATGGAATGACTGCAGACTGGTATCAATTTGATCCCAAGTTCCTTGCAGAGGTTTCTGCGAAGATTTGCAACAGTGTTCGTGGAGTAAATAGAATAGTTTATGACATAACCTCAAAACCTCCATCAACTGTAGAGTGGGAGTGA___TGTGCATAATACATAAATTGCATGATTTTGTATTATTTATTTGTGGTGAACCACAATTAAATAATACTATTTCCTGGATATCTTCATGGGAAAGGAATTTTTTCAGGAAACTTTTTGTAAAAATGTCGGCGTCCGAGTTTTCTACTGCTCCATTGTCAATACGTAGTAATGTATTTTGATTTTTTAAGGCTTTATTTAGTCTCAAAGTTCGTGCTTTATAAGAGAAACAAGCATACTAATGATCTAATTTTTTAACTTTATATCATTAGATTTTCAACCAAAG

Fln Alignment:

sp_v1.1_unigene122___VVLILDFGSQYTHLITRRIRQLAV-CSVCLSGTSPLSAMAALNPSVIILSGGPHSVHEEGAP-SLPDGFFDYVWEKGIHVLGICYGLQLIVKMMGGEVKPAESQEYGRMEVRMHEGSKLYGDIFVGGTQNVWMSHGDEVVRLPEGFVVVATSLQNAIAAIENPH-KGLYGFQYHPEVTHSVLGMETLRHFLFS
P51362_____________MILIIDNYDSFTYNLAQCVGELGHDVLVCRNDEIDVVKIKKLNPEKIIISPGPGKPTESGISLDVISSLAEY-----IPILGVCLGHQSIGYINGGSIIKVPKIMHGKTSQIYHDREDLFINLPNPFIATRYHSLIIDRANFPTNLAVTAWTDNNIIMACRHKHYKMLRGIQFHPESLWTVCGQQLLKNFLDS

SNPs (tot: 27)

Position	A %	C %	G %	T %	Probability
561	30		70		1.0
592		66	33		1.0
612		33		66	1.0
629		88		11	0.923564
778		80		20	0.995493
899			85	14	0.993533
1000	33		66		0.997452
1289	80			20	0.995493
1290		80	20		0.995493
1291			20	80	0.995493
1292			20	80	0.995493
1329	75	25			0.996473
1337	25		75		0.996473
1385	20	80			0.995493
1386		80		20	0.995493
1387		80	20		0.995493
1388			20	80	0.995493
1709	85			14	1.0
1766	91		8		0.999766
1891		50		50	1.0
1986	40		40		1.0
1990	80			20	0.995493
1992	80	20			0.995493
1993		80	20		0.995493
1994		20		80	0.995493
1996	80		20		0.995493
2001		80	20		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain