SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene204585

Length: 432 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene204585 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	60S ribosomal protein L31 n=1 Tax=Cyanophora paradoxa RepID=RL31_CYAPA	-	-	4.0e-39	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	61%
Sma3	60S ribosomal protein L31	-	-	9.80909e-45	-

Source	Gene names
Sma3	60SRPL31a; At2g19740; At4g26230; At5g56710; CHLREDRAFT_78109; F6F22.23; GSVIVT00008838001; GSVIVT00016611001; MICPUCDRAFT_24390; MICPUN_91199; MIK19.16; OJ1134_H03.20; OJ2056_H01.22-1; OSJNBa0025J22.10; OSTLU_17087; Os02g0717800; Os06g0319700; Os08g050530

Source	GOs	Term	Type	Identity
Sma3	cell wall	GO:0005618	Cellular Component	-
Sma3	ribosome	GO:0005840	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	cytosolic large ribosomal subunit	GO:0022625	Cellular Component	-
Sma3	structural constituent of ribosome	GO:0003735	Molecular Function	-
Sma3	translation	GO:0006412	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Ribosomal protein L31e	IPR000054	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT4G26230.1	Ribosomal protein L31e family protein chr4:13286026-13286553 FORWARD LENGTH=119	9.94922e-44	57%
RefSeq	Arabidopsis thaliana	NP_194353.1	60S ribosomal protein L31-2 [Arabidopsis thaliana]	9.94922e-44	57%
RefSeq	Populus trichocarpa	XP_002314026.1	predicted protein [Populus trichocarpa]	0.0	58%

Full-Lengther Next Prediction

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain