SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene201233

Length: 174 nt

UniGene Fasta

>sp_v3.0_unigene201233
TGTCCTGGTGTGCAGATTTTAGCTGCCTTTGACGATGCAGTTAAAGATGGAGTGGATATTGTGTCCATCTCAATTGGAGTTCGGTCCAGTAATCAGGCCGATTTTGTGAACGATGCAATTGCCATAGGAGCATTTCATGCTACTCAGAAAGGAATTCTGGTTGTATCCTCTGCA

Ace file of the UniGene sp_v3.0_unigene201233

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Subtilisin-like protein n=1 Tax=Picea abies RepID=Q40764_PICAB	-	-	2.0e-23	98%
FL-Next	tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa).	-	-	0.0	98%
Sma3	Putative subtilisin-like protein	-	-	6.271e-09	-

Source	ECs	Term	Type	e value	Identity
Sma3	Cucumisin.	EC:3.4.21.25	-	4.401e-06	-

Source	Gene names
Sma3	GSVIVT00024216001; GSVIVT00024218001; GSVIVT00033954001; OSJNBa0029G06.17; Os06g0624100; OsI_01395; OsI_23755; OsI_31804; OsJ_01304; OsJ_22024; OsJ_29791; P0025D05.29; POPTRDRAFT_415609; POPTRDRAFT_559867; POPTRDRAFT_709916; RCOM_0622480; RCOM_1482970; SS

Source	GOs	Term	Type	Identity
Sma3	serine-type endopeptidase activity	GO:0004252	Molecular Function	-
Sma3	identical protein binding	GO:0042802	Molecular Function	-
Sma3	proteolysis	GO:0006508	Biological Process	-
Sma3	negative regulation of catalytic activity	GO:0043086	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Peptidase S8/S53, subtilisin/kexin/sedolisin	IPR000209	-	-
Sma3	Zinc finger, DHHC-type, palmitoyltransferase	IPR001594	-	-
Sma3	Protease-associated domain, PA	IPR003137	-	-
Sma3	Proteinase inhibitor I9	IPR010259	-	-
Sma3	Peptidase S8, subtilisin-related	IPR015500	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G20160.1	ATSBT5.2 Subtilisin-like serine endopeptidase family protein chr1:6990852-6993854 REVERSE LENGTH=769	2.0e-15	56%
RefSeq	Arabidopsis thaliana	NP_001031070.1	Subtilisin-like serine endopeptidase-like protein [Arabidopsis thaliana]	3.0e-15	56%
RefSeq	Populus trichocarpa	XP_002303965.1	predicted protein, partial [Populus trichocarpa]	1.0e-16	63%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: Q40764

Fln msg: Distance to subject end: 454 aas, your sequence is shorter than subject: 58 - 779

Fln protein: CPGVQILAAFDDAVKDGVDIVSISIGVRSSNQADFVNDAIAIGAFHATQKGILVVSSA

Protein Length: 59

Fln nts: TGTCCTGGTGTGCAGATTTTAGCTGCCTTTGACGATGCAGTTAAAGATGGAGTGGATATTGTGTCCATCTCAATTGGAGTTCGGTCCAGTAATCAGGCCGATTTTGTGAACGATGCAATTGCCATAGGAGCATTTCATGCTACTCAGAAAGGAATTCTGGTTGTATCCTCTGCA

Fln Alignment:

AllPine_b_c44495___CPGVQILAAFDDAVKDGVDIVSISIGVRSSNQADFVNDAIAIGAFHATQKGILVVSSA
Q40764________________CPGVQILAAFDDAVKDGVDIVSISIGVRSSNQADFVKDAIAIGAFHATQKGILVVSSA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain