SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene200153

Length: 239 nt

UniGene Fasta

>sp_v3.0_unigene200153
TTGTGGGCGACTTTCTGCAATCTCTTGGGGAAAATACATCAAATCAGCCCTCCGCATCCACCTGGTGGAAGACCACGCAGAAGTACGAGGGTGCCGCCTCTAACAAGGCTGCCCCCTCTAGTACTATAATTCTTGGAAAGCAGAAGCTGGATCAAGATTATTCCGTTGGCAAGTCGCTCAAGAGGTCTGACATTGCTGCTCTGGTTGAAGCTGCTGTCAAGTCAAGAGCTCTGCCTCTG

Ace file of the UniGene sp_v3.0_unigene200153

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	protein EXORDIUM like 3 [Arabidopsis thaliana] gb\|AAL16255.1\|AF428325_1 AT5g51550/K17N15_10 [Arabidopsis thaliana] dbj\|BAB08671.1\| unnamed protein product [Arabidopsis thaliana] gb\|AED96097.1\| protein EXORDIUM like 3 [Arabidopsis thaliana]	-	-	4.0e-08	39%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	72%

Source	InterPros	Term	Type	e value	Identity
Sma3	Phosphate-induced protein 1	IPR006766	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LQ56

Fln msg: Distance to subject end: 192 aas, your sequence is shorter than subject: 79 - 359

Fln protein: VGDFLQSLGENTSNQPSASTWWKTTQKYEGAASNKAAPSSTIILGKQKLDQDYSVGKSLKRSDIAALVEAAVKSRALPL

Protein Length: 80

Fln nts: TTGTGGGCGACTTTCTGCAATCTCTTGGGGAAAATACATCAAATCAGCCCTCCGCATCCACCTGGTGGAAGACCACGCAGAAGTACGAGGGTGCCGCCTCTAACAAGGCTGCCCCCTCTAGTACTATAATTCTTGGAAAGCAGAAGCTGGATCAAGATTATTCCGTTGGCAAGTCGCTCAAGAGGTCTGACATTGCTGCTCTGGTTGAAGCTGCTGTCAAGTCAAGAGCTCTGCCTCTG

Fln Alignment:

AllPine_b_c42801___VGDFLQSLGENT-----SNQPSASTWWKTTQKYEGAASNKAAPS------STIILGKQKLDQDYSVGKSLKRSDIAALVEAAVKSRALPL
B8LQ56________________VGDFLQSLGAKTLEGTNAKLPSASTWWKTTEKYEGAASNKAAPSNKAAPSSVIMLGKQKVDQDYSLGNSLKRSDIAALVQAAVKSGAVPL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain