SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene196940

Length: 117 nt

UniGene Fasta

>sp_v3.0_unigene196940
CAGCGAACATTCTTTTATTGTTGTGTACAAATAGTTTTGAGCACAGTCAATTGGTATTAAGAGAAGGTGTGATCCCATCTTTAGTTCATATTTCTGTTGATGGAAGCCCAGATGGGA

Ace file of the UniGene sp_v3.0_unigene196940

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	82%

Source	Gene names
Sma3	PHYPADRAFT_132749;

Source	GOs	Term	Type	Identity
Sma3	ubiquitin ligase complex	GO:0000151	Cellular Component	-
Sma3	ubiquitin-protein ligase activity	GO:0004842	Molecular Function	-
Sma3	binding	GO:0005488	Molecular Function	-
Sma3	protein ubiquitination	GO:0016567	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Armadillo	IPR000225	-	-
Sma3	U box domain	IPR003613	-	-
Sma3	Armadillo-like helical	IPR011989	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5A903

Fln msg: Distance to subject end: 71 aas, your sequence is shorter than subject: 38 - 371

Fln protein: ANILLLLCTNSFEHSQLVLREGVIPSLVHISVDGSPDG

Protein Length: 39

Fln nts: CAGCGAACATTCTTTTATTGTTGTGTACAAATAGTTTTGAGCACAGTCAATTGGTATTAAGAGAAGGTGTGATCCCATCTTTAGTTCATATTTCTGTTGATGGAAGCCCAGATGGGA

Fln Alignment:

AllPine_b_c37687___LLLLCTNSFEHSQLVLREGVIPSLVHISVDGSPDG
D5A903________________LLLLCTNSFEHSQMVLREGVIPSLVTLSMNGSPRG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain