SustainPineDB

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Assembly info
Unigenes
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SSRs
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene193070

Length: 525 nt

UniGene Fasta

>sp_v3.0_unigene193070
CGTCTATTGCTGGTGTTCAGTGGGCTGCTGACCGCGCCAAGTCTTCTGGCCGCCCCTCTGTTGCTAACATGTCCCTCGGTGGCACCATCTCCGCTGCCCTCGACAACGCCGTCAACTCCGCTATCAGCAGTGGTCTCTTGATGGCCGTTGCCGCTGGCAATGATAACATCAATGCTTGTCTGGCTTCCCCCGCTCGTGCCACCAGCGCCATCACCGTTGGTTCCACCCAGCTCAGCGCCTCTGGCACCAACCAAATCGATGCTCGCAGCTCCTTCTCCAACTTTGGCACCTGCGTCAACATCTTTGCTCCTGGTAGCGCCATCCTCGGTGCTTGGTATGACTGCGACTCGTGCACCAAGACCATCTCTGGAACCTCCATGGCCAGCCCTCACGTCTGTGGTATCATCGCCAACATCCTCACTGAAAACCCCTCGTACACTCAGGCCAACGCTCTCACCAAGCTTCAGCAATGGGCCCAATCTAACATCATCACTCTCAACTGCGCGAACGATGTCTGCAAGCAAT

Ace file of the UniGene sp_v3.0_unigene193070

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Subtilisin-like serine proteinase n=1 Tax=Acanthamoeba healyi RepID=Q9NHN3_9EUKA	-	-	2.0e-40	50%
FL-Next	tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley).	-	-	0.0	45%

Source	Gene names
Sma3	PHATRDRAFT_48491; PHATRDRAFT_48492; PHATRDRAFT_48493; PHATRDRAFT_48494; PHATRDRAFT_48495; PHATRDRAFT_bd1558;

Source	GOs	Term	Type	e value	Identity
Sma3	serine-type endopeptidase activity	GO:0004252	Molecular Function	0.0	-
Sma3	proteolysis	GO:0006508	Biological Process	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Peptidase S8/S53, subtilisin/kexin/sedolisin	IPR000209	-	-
Sma3	PT repeat	IPR006970	-	-
Sma3	Proteinase inhibitor I9	IPR010259	-	-
Sma3	Peptidase S8, subtilisin-related	IPR015500	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: F2E033

Fln msg: Distance to subject end: 99 aas, your sequence is shorter than subject: 174 - 520

Fln protein: SIAGVQWAADRAKSSGRPSVANMSLGGTISAALDNAVNSAISSGLLMAVAAGNDNINACLASPARATSAITVGSTQLSASGTNQIDARSSFSNFGTCVNIFAPGSAILGAWYDCDSCTKTISGTSMASPHVCGIIANILTENPSYTQANALTKLQQWAQSNIITLNCANDVCKQ

Protein Length: 175

Fln nts: CGTCTATTGCTGGTGTTCAGTGGGCTGCTGACCGCGCCAAGTCTTCTGGCCGCCCCTCTGTTGCTAACATGTCCCTCGGTGGCACCATCTCCGCTGCCCTCGACAACGCCGTCAACTCCGCTATCAGCAGTGGTCTCTTGATGGCCGTTGCCGCTGGCAATGATAACATCAATGCTTGTCTGGCTTCCCCCGCTCGTGCCACCAGCGCCATCACCGTTGGTTCCACCCAGCTCAGCGCCTCTGGCACCAACCAAATCGATGCTCGCAGCTCCTTCTCCAACTTTGGCACCTGCGTCAACATCTTTGCTCCTGGTAGCGCCATCCTCGGTGCTTGGTATGACTGCGACTCGTGCACCAAGACCATCTCTGGAACCTCCATGGCCAGCCCTCACGTCTGTGGTATCATCGCCAACATCCTCACTGAAAACCCCTCGTACACTCAGGCCAACGCTCTCACCAAGCTTCAGCAATGGGCCCAATCTAACATCATCACTCTCAACTGCGCGAACGATGTCTGCAAGCAAT

Fln Alignment:

AllPine_b_c31263___IAGVQWAAD-----RAKSSGRPSVANMSLGGTISAALDNAVNSAISSGLLMAVAAGNDNINACLASPARATSAITVGSTQLSASGTNQIDARSSFSNFGTCVNIFAPGSAILGAWYDCDSCTKTISGTSMASPHVCGIIANILTENPSYTQANAL-TKLQQWAQSNIIT
F2E033________________VKGVEWAAADHKRRAAKDPKAKSAANMSLGGGASKTLDKVVNAAVDAGVHFAVAAGNDNRNACNYSPATAEKAVTVGASAID-------DSMATFSNIGKCVDVFAPGKDILSTWIGSNVATNTISGTSMASPHVAGLLAYLASESADPIPPKVLKDKLLKMATKDKIT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain