SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene187817

Length: 155 nt

UniGene Fasta

>sp_v3.0_unigene187817
TGGCACATGATTTACAAGCCCCATTTATTGCCTCTTTGTCAAAGGATTTACATGTGCTTCCAGACTTCCACGGCAACAGATCTCCAGTTGCAGATCCGAAAGCAAAGGGATGATTTGTGGCCTGACACTTGATACCAGTGACAAATCATTGGCTA

Ace file of the UniGene sp_v3.0_unigene187817

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	[C] COG1069 Ribulose kinase	-	-	2.0e-05	85%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	94%

Source	Gene names
Sma3	GSVIVT00031422001;

Source	GOs	Term	Type	e value	Identity
Sma3	phosphotransferase activity, alcohol group as acceptor	GO:0016773	Molecular Function	0.0	-
Sma3	carbohydrate metabolic process	GO:0005975	Biological Process	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Carbohydrate kinase, FGGY	IPR000577	-	-
Sma3	Carbohydrate kinase, FGGY-related	IPR006003	-	-
Sma3	Carbohydrate kinase, FGGY, N-terminal	IPR018484	-	-
Sma3	Carbohydrate kinase, FGGY, C-terminal	IPR018485	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT4G30310.2	-	7.0e-13	66%
RefSeq	Arabidopsis thaliana	NP_194760.2	FGGY family of carbohydrate kinase [Arabidopsis thaliana]	9.0e-13	66%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LK74

Fln msg: Overlapping hits, possible frame ERROR between 110 and 98, Distance to subject end: 134 aas, your sequence is shorter than subject: 51 - 575

Fln protein: AHDLQAPFIASLSKDLHVLPDFHGNRSPVADxxxxxxICGLTLDTSDKSLA

Protein Length: 52

Fln nts: TGGCACATGATTTACAAGCCCCATTTATTGCCTCTTTGTCAAAGGATTTACATGTGCTTCCAGACTTCCACGGCAACAGATCTCCAGTTGCAGATxxxxxxxxxxxxxxxxxxATTTGTGGCCTGACACTTGATACCAGTGACAAATCATTGGCTA

Fln Alignment:

AllPine_b_c19631___AHDLQAPFIASLSKDLHVLPDFHGNRSPVADPxxxxMICGLTLDTSDKSLA
B8LK74________________AHDLQVPFVASLSKDLHVLPDFHGNRSPVADPxxxxTISGLTLDTNDKSLA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain