SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene167673

Length: 166 nt

UniGene Fasta

>sp_v3.0_unigene167673
TACTAACAATACAACATGGACATTGCAGTATATTAATCTCTTCATGGCTAATATTGGATTTATCATTTTTTCTGGACAAGCTATAAAGGTAATATATAGCTTGTATACCACTGAAGATTTGTTGAAGCTACCTTATTGCATTACTATCGGTGGGCTAGTTTGCATT

Ace file of the UniGene sp_v3.0_unigene167673

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Proline transporter n=1 Tax=Elaeis guineensis RepID=F2Z8K2_ELAGV	-	-	1.0e-12	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	66%
Sma3	Proline/glycine betaine transporter	-	-	7.797e-06	-

Source	Gene names
Sma3	AAPA;

Source	GOs	Term	Type	e value	Identity
Sma3	integral to membrane	GO:0016021	Cellular Component	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Amino acid transporter, transmembrane	IPR013057	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G55740.1	PROT2, ATPROT2 proline transporter 2 chr3:20695786-20698157 FORWARD LENGTH=439	2.0e-14	56%
RefSeq	Arabidopsis thaliana	NP_974444.1	proline transporter 2 [Arabidopsis thaliana]	2.0e-14	56%
RefSeq	Populus trichocarpa	XP_002311196.1	proline transporter [Populus trichocarpa]	3.0e-14	54%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9P182

Fln msg: Distance to subject end: 81 aas, your sequence is shorter than subject: 55 - 247

Fln protein: TNNTTWTLQYINLFMANIGFIIFSGQAIKVIYSLYTTEDLLKLPYCITIGGLVCI

Protein Length: 56

Fln nts: TACTAACAATACAACATGGACATTGCAGTATATTAATCTCTTCATGGCTAATATTGGATTTATCATTTTTTCTGGACAAGCTATAAAGGTAATATATAGCTTGTATACCACTGAAGATTTGTTGAAGCTACCTTATTGCATTACTATCGGTGGGCTAGTTTGCATT

Fln Alignment:

HIF1XHV01CDX3U___TWTLQYINLFMANIGFIIFSGQAIKVIYSLYTTEDLLKLPYCITIGGLVC
A9P182________________TWALQYINLFMSNVGYIILAGEAMKAIYTFYDNEGILKLPYCITITGIVC

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain