SustainPineDB

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Assembly info
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SNPs
SSRs
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene167638

Length: 160 nt

UniGene Fasta

>sp_v3.0_unigene167638
AACCTCAATGGCTTCCGCGGACGATTTCAAAGCGATTGCGGGTGCCAAAGTTTTGATGGTCGGTGCCGGCGGCATTGGATGCGAGCTTCTCAAAACCCTCGCACTTACGGGCTTCAAAGATGTCCACGTTATTGACATGGATACAATTGAAGTTAGCAAT

Ace file of the UniGene sp_v3.0_unigene167638

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	SUMO-activating enzyme subunit 2 n=2 Tax=Arabidopsis thaliana RepID=F4IHI1_ARATH	-	-	7.0e-15	78%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	81%
Sma3	SUMO1 activating enzyme subunit 2	-	-	9.453e-09	-

Source	Gene names
Sma3	At2g21470; GSVIVT00019920001; GSVIVT00036327001; MICPUCDRAFT_3065; MICPUCDRAFT_36729; MICPUN_52640; MICPUN_63834; OSTLU_1406; OSTLU_30829; Os01g0271500; Os07g0586500; OsI_01345; OsI_26664; OsJ_01249; OsJ_24922; P0693B08.15; PHATRDRAFT_44749; PHYPADRAFT_14

Source	GOs	Term	Type	Identity
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	small protein activating enzyme activity	GO:0008641	Molecular Function	-
Sma3	acid-amino acid ligase activity	GO:0016881	Molecular Function	-
Sma3	SUMO activating enzyme activity	GO:0019948	Molecular Function	-
Sma3	protein modification process	GO:0006464	Biological Process	-
Sma3	embryo development ending in seed dormancy	GO:0009793	Biological Process	-
Sma3	protein sumoylation	GO:0016925	Biological Process	-
Sma3	protein neddylation	GO:0045116	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Ubiquitin/SUMO-activating enzyme E1	IPR000011	-	-
Sma3	Ubiquitin-activating enzyme repeat	IPR000127	-	-
Sma3	UBA/THIF-type NAD/FAD binding fold	IPR000594	-	-
Sma3	Carbamoyl-phosphate synthetase, large subunit, ATP-binding	IPR005479	-	-
Sma3	MoeZ/MoeB	IPR007901	-	-
Sma3	E2 binding	IPR014929	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-
Sma3	Ubiquitin-activating enzyme, E1, active site	IPR018074	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G21470.2	SAE2, ATSAE2, EMB2764 SUMO-activating enzyme 2 chr2:9198752-9202136 FORWARD LENGTH=700	4.0e-20	78%
RefSeq	Arabidopsis thaliana	NP_179742.2	SUMO-activating enzyme subunit 2 [Arabidopsis thaliana]	5.0e-20	78%
RefSeq	Populus trichocarpa	XP_002306122.1	predicted protein, partial [Populus trichocarpa]	2.0e-16	87%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LQD0

Fln msg: Distance to subject end: 369 aas, your sequence is shorter than subject: 53 - 448

Fln protein: TSMASADDFKAIAGAKVLMVGAGGIGCELLKTLALTGFKDVHVIDMDTIEVSN

Protein Length: 54

Fln nts: AACCTCAATGGCTTCCGCGGACGATTTCAAAGCGATTGCGGGTGCCAAAGTTTTGATGGTCGGTGCCGGCGGCATTGGATGCGAGCTTCTCAAAACCCTCGCACTTACGGGCTTCAAAGATGTCCACGTTATTGACATGGATACAATTGAAGTTAGCAAT

Fln Alignment:

HIF1XHV01AHVEE___KVLMVGAGGIGCELLKTLALTGFKDVHVIDMDTIEVSN
B8LQD0________________KVLVVGAGGLGCELLKDLALSGFKKLEVIDMDTIEVSN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain