SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene167611

Length: 186 nt

UniGene Fasta

>sp_v3.0_unigene167611
TAAGGTAAGTACCAGATAGTCCCGGTGTTGTTCCTCACACATTCAAGGAACTCTTTAGACAGGCTGCCTTGGACAGCAGTTTAAACTTTACCTTTACAATTAGCATGCTAGAGGTTTACAAGGGATCTCTGAGAGATTTGCTTGTGTGTCGACCTACAAGGCCAACAGAACCCTCTGCAAAATGCC

Ace file of the UniGene sp_v3.0_unigene167611

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	BY-2 kinesin-like protein 5 [Nicotiana tabacum]	-	-	7.0e-11	56%
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	0.0	56%

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G27950.1	P-loop containing nucleoside triphosphate hydrolases superfamily protein chr5:9984774-9987493 FORWARD LENGTH=625	5.0e-11	46%
RefSeq	Arabidopsis thaliana	NP_198147.2	kinesin motor protein-like protein [Arabidopsis thaliana]	7.0e-11	46%
RefSeq	Populus trichocarpa	XP_002304845.1	predicted protein [Populus trichocarpa]	1.0e-11	49%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A9S9E3

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 210 aas, your sequence is shorter than subject: 61 - 366

Fln protein: R*VPDSPGVVPHTFKELFRQAALDSSLNFTFTISMLEVYKGSLRDLLVCRPTRPTEPSAKC

Protein Length: 62

Fln nts: TAAGGTAAGTACCAGATAGTCCCGGTGTTGTTCCTCACACATTCAAGGAACTCTTTAGACAGGCTGCCTTGGACAGCAGTTTAAACTTTACCTTTACAATTAGCATGCTAGAGGTTTACAAGGGATCTCTGAGAGATTTGCTTGTGTGTCGACCTACAAGGCCAACAGAACCCTCTGCAAAATGCC

Fln Alignment:

HIF1XHV01BX0C7___DSPGVVPHTFKELFRQAALDSSLNFTFTISMLEVYKGSLRDLLVCRPTRPTEPSAKC
A9S9E3________________DDPGVVPRSLRRLFEEASYDTNIQYSYSLSMLEVYKGSLRDLLVARPTRHTD-ATKC

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain