SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene167429

Length: 213 nt

UniGene Fasta

>sp_v3.0_unigene167429
TATGTGAACAGTTAGATGTTTCTAATTGAGATTAGTTGATAGCCAGACACTCAATTGGTTGACAGCAAGACGCCTTTTCTACACTTTGCATCAAATGCTTGATGATGGTAGACTTACGGTGGCCAAGGTCGCACCGTTAGTTTCTCAAACAGAGTCATTATCATGACATCCAACCTTGGAGCAGAGCACTTGCTTGCTGCATTGTCTGGCCAC

Ace file of the UniGene sp_v3.0_unigene167429

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	heat shock protein 101 [Funaria hygrometrica]	-	-	7.0e-08	83%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	93%
Sma3	Heat shock protein 101	-	-	2.244e-21	-

Source	Gene names
Sma3	At1g74310; F1O17.2; GSVIVT00016219001; HSP101; HSP101c; Hsp101b; LOC_Os05g44340; Os05g0519700; OsI_20656; P0483D07.3; P0599F04.13; PHYPADRAFT_224802; POPTRDRAFT_742398; RCOM_1469930; SB100; VITISV_012280; hsp101; hsp101b-A; hsp101b-B; hsp101c-A; hsp101c-B

Source	GOs	Term	Type	Identity
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	nucleoside-triphosphatase activity	GO:0017111	Molecular Function	-
Sma3	response to stress	GO:0006950	Biological Process	-
Sma3	response to heat	GO:0009408	Biological Process	-
Sma3	response to high light intensity	GO:0009644	Biological Process	-
Sma3	protein metabolic process	GO:0019538	Biological Process	-
Sma3	response to hydrogen peroxide	GO:0042542	Biological Process	-
Sma3	protein unfolding	GO:0043335	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	GPCR, rhodopsin-like, 7TM	IPR000276	-	-
Sma3	Chaperonin ClpA/B	IPR001270	-	-
Sma3	AAA+ ATPase domain	IPR003593	-	-
Sma3	ATPase, AAA-type, core	IPR003959	-	-
Sma3	Clp, N-terminal	IPR004176	-	-
Sma3	ATPase, AAA-2	IPR013093	-	-
Sma3	Chaperonin ClpA/B, conserved site	IPR018368	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NQA7

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 179 aas, your sequence is shorter than subject: 71 - 278

Fln protein: YVNS*MFLIEIS**PDTQLVDSKTPFLHFASNA**W*TYGGQGRTVSFSNRVIIMTSNLGAEHLLAALSGH

Protein Length: 72

Fln nts: TATGTGAACAGTTAGATGTTTCTAATTGAGATTAGTTGATAGCCAGACACTCAATTGGTTGACAGCAAGACGCCTTTTCTACACTTTGCATCAAATGCTTGATGATGGTAGACTTACGGTGGCCAAGGTCGCACCGTTAGTTTCTCAAACAGAGTCATTATCATGACATCCAACCTTGGAGCAGAGCACTTGCTTGCTGCATTGTCTGGCCAC

Fln Alignment:

HIF1XHV01AMDEQ___GQGRTVSFSNRVIIMTSNLGAEHLLAALSGH
A9NQA7________________GQGRTVSFSNTVIIMTSNLGAEHLLAALTGH

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain