SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene165203

Length: 121 nt

UniGene Fasta

>sp_v3.0_unigene165203
CCTCTATAGGCTATTCCAGGTGTGCCCAAGATAAAGGACACGCATAATCCAGCAACATGGATGTTAGAGGTCAGCTCTATGGGTTCTGAGCAACACCTTGGTATAGACTTTACTCAGATCT

Ace file of the UniGene sp_v3.0_unigene165203

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9RZZ4_RICCO	-	-	9.0e-08	69%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	75%

Source	Gene names
Sma3	POPTRDRAFT_564329; POPTRDRAFT_912833; RCOM_1489990;

Source	GOs	Term	Type	e value	Identity
Sma3	membrane	GO:0016020	Cellular Component	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	ABC transporter-like	IPR003439	-	-
Sma3	AAA+ ATPase domain	IPR003593	-	-
Sma3	ABC-2 type transporter	IPR013525	-	-
Sma3	Plant PDR ABC transporter associated	IPR013581	-	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002311359.1	predicted protein [Populus trichocarpa]	7.0e-12	72%

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LPF4

Fln msg: Unexpected stop codon in the beginning of your sequence, STOP codon was not found. Distance to subject end: 11 aas, your sequence is shorter than subject: 40 - 283

Fln protein: PL*AIPGVPKIKDTHNPATWMLEVSSMGSEQHLGIDFTQI

Protein Length: 41

Fln nts: CCTCTATAGGCTATTCCAGGTGTGCCCAAGATAAAGGACACGCATAATCCAGCAACATGGATGTTAGAGGTCAGCTCTATGGGTTCTGAGCAACACCTTGGTATAGACTTTACTCAGATCT

Fln Alignment:

HA8LWWM01CUJ9J___AIPGVPKIKDTHNPATWMLEVSSMGSEQHLGIDFTQI
B8LPF4________________AIPGVPKIEDKHNPATWILEVTSMAAEQRLSIDFAQI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain