SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene164569

Length: 199 nt

UniGene Fasta

>sp_v3.0_unigene164569
TGAAAGGCCATCCTTTTTTCAGTAATGTAAATTGGGACACATTGGCAATGCAAAAGGCAGCTTTTGTACCAACTCCTGAAAGTGCAGATGATACAAGCTATTTCATGTCACGACATTCACAAAGCTCACATGCAATACAAGGGCATCTAGATTCAAGTGACTATTCTACCAGTACAACAAGTTCTAATTCATTAAATAT

Ace file of the UniGene sp_v3.0_unigene164569

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	protein kinase-like protein [Arabidopsis thaliana] gb\|AEE32085.1\| protein kinase-like protein [Arabidopsis thaliana]	-	-	4.0e-10	69%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	77%

Source	Gene names
Sma3	At1g45160; GSVIVT00014640001;

Source	GOs	Term	Type	Identity
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	AGC-kinase, C-terminal	IPR000961	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3		IPR017442	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G45160.2	-	5.0e-14	69%
RefSeq	Arabidopsis thaliana	NP_175130.2	protein kinase-like protein [Arabidopsis thaliana]	7.0e-14	69%
RefSeq	Populus trichocarpa	XP_002318507.1	predicted protein [Populus trichocarpa]	7.0e-12	71%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: F6H1H6

Fln msg: Distance to subject end: 58 aas, your sequence is shorter than subject: 65 - 1109

Fln protein: KGHPFFSNVNWDTLAMQKAAFVPTPESADDTSYFMSRHSQSSHAIQGHLDSSDYSTSTTSSNSLN

Protein Length: 66

Fln nts: TGAAAGGCCATCCTTTTTTCAGTAATGTAAATTGGGACACATTGGCAATGCAAAAGGCAGCTTTTGTACCAACTCCTGAAAGTGCAGATGATACAAGCTATTTCATGTCACGACATTCACAAAGCTCACATGCAATACAAGGGCATCTAGATTCAAGTGACTATTCTACCAGTACAACAAGTTCTAATTCATTAAATAT

Fln Alignment:

HA8LWWM01BE9H8___KGHPFFSNVNWDTLAMQKAAFVPTPESADDTSYFMSRHSQ
F6H1H6________________KTHPFFKGVNWDTLALQKAVFVPQPDSADDTSYFVSRYSQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain