SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene163859

Length: 166 nt

UniGene Fasta

>sp_v3.0_unigene163859
AGGGTTGACTTCCTTTCTGCAGTATTAGGGAGTAGGTTTTCAAGAGAATTGTTCAGTAAAGAGTACATAACCGCTCTCACATATGAGCATCTGCTGGCGGGATCGGCTACGACTTCGTTCACCATTTCTGTCATACTCTACCTCGTATCGACCCACCAGGATGTCC

Ace file of the UniGene sp_v3.0_unigene163859

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Os01g0701300 protein n=2 Tax=Oryza sativa Japonica Group RepID=C7IWE3_ORYSJ	-	-	1.0e-11	64%
FL-Next	tr=Thromboxane-A synthase-like; Oryza sativa subsp. japonica (Rice).	-	-	0.0	64%
Sma3	Putative thromboxane-A synthase	-	-	3.185e-08	-

Source	Gene names
Sma3	AT2G26170; At2g26170; Os01g0700900; Os01g0701400; Os01g0701500; Os06g0565100; OsI_03409; OsI_03410; OsI_23403; OsJ_03151; OsJ_03154; OsJ_03155; OsJ_21727; P0047E11.22; P0454A11.41; P0513E02.10;

Source	GOs	Term	Type	Identity
Sma3	monooxygenase activity	GO:0004497	Molecular Function	-
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	heme binding	GO:0020037	Molecular Function	-
Sma3	auxin polar transport	GO:0009926	Biological Process	-
Sma3	regulation of meristem structural organization	GO:0009934	Biological Process	-
Sma3	positive regulation of flavonoid biosynthetic process	GO:0009963	Biological Process	-
Sma3	secondary shoot formation	GO:0010223	Biological Process	-
Sma3	carotenoid biosynthetic process	GO:0016117	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Cytochrome P450, E-class, group IV	IPR002403	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G26170.1	CYP711A1, MAX1 cytochrome P450, family 711, subfamily A, polypeptide 1 chr2:11140851-11143270 FORWARD LENGTH=522	2.0e-15	59%
RefSeq	Arabidopsis thaliana	NP_850074.1	cytochrome P450, family 711, subfamily A, polypeptide 1 [Arabidopsis thaliana]	2.0e-15	59%
RefSeq	Populus trichocarpa	XP_002324142.1	cytochrome P450, partial [Populus trichocarpa]	2.0e-13	52%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: Q5N8H9

Fln msg: Distance to subject end: 172 aas, your sequence is shorter than subject: 55 - 385

Fln protein: RVDFLSAVLGSRFSRELFSKEYITALTYEHLLAGSATTSFTISVILYLVSTHQDV

Protein Length: 56

Fln nts: AGGGTTGACTTCCTTTCTGCAGTATTAGGGAGTAGGTTTTCAAGAGAATTGTTCAGTAAAGAGTACATAACCGCTCTCACATATGAGCATCTGCTGGCGGGATCGGCTACGACTTCGTTCACCATTTCTGTCATACTCTACCTCGTATCGACCCACCAGGATGTCC

Fln Alignment:

HA8LWWM01CCHEO___RVDFLSAVLGSRFS----RELFSKEYITALTYEHLLAGSATTSFTISVILYLVSTHQDV
Q5N8H9________________RKDFLSVVLAARESNKSWRELLTPDYISALTYEHLLAGSATTAFTLSTVLYLVSKHPEV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain