SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene162403

Length: 263 nt

UniGene Fasta

>sp_v3.0_unigene162403
AATAATGATGCTTGAGAGATGACAGATGCAGCTATAGGTCAATGAATTTATGACAAATGGCATTCCCTTTAACCTTGTGCGATCTCCTTACTAGGCAAAGATGATAAATGTATTGAATGAATCCCCAAAAGGGTACATGAGCTCTAGATATGAGAAGGTTTGCACTACATTGTTGAGTGCTAAAAAGTTAGATTTGGAGGCTAAATTAAGCTCCATTCATAATTCATGGCGCATTTAAGGGGTATCCATCATTTCTGATGGAT

Ace file of the UniGene sp_v3.0_unigene162403

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Os02g0513700 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0E0X9_ORYSJ	-	-	3.0e-07	42%
FL-Next	tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice).	-	-	0.0	47%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9G060

Fln msg: Unexpected stop codon in the beginning of your sequence, Unexpected STOP codon at 3' end. Distance to subject end: 121 aas, your sequence is shorter than subject: 79 - 368

Fln protein: IMMLER*QMQL*VNEFMTNGIPFNLVRSPY*AKMINVLNESPKGYMSSRYEKVCTTLLSAKKLDLEAKLSSIHNSWRI*

Protein Length: 80

Fln nts: AATAATGATGCTTGAGAGATGACAGATGCAGCTATAGGTCAATGAATTTATGACAAATGGCATTCCCTTTAACCTTGTGCGATCTCCTTACTAGGCAAAGATGATAAATGTATTGAATGAATCCCCAAAAGGGTACATGAGCTCTAGATATGAGAAGGTTTGCACTACATTGTTGAGTGCTAAAAAGTTAGATTTGGAGGCTAAATTAAGCTCCATTCATAATTCATGGCGCATTTAAGGGGTATCCATCATTTCTGATGGAT

Fln Alignment:

HA8LWWM01A1LDO___NGIPFNLVRSPY*AKMINVLNESPKGYMSSRYEKVCTTLLSAKKLDLEAKLSSIHNSWRI*GVSIISDG
B9G060________________NGIPFNILRSPQFAEMVTAINKAPSGYKGPSSEKARTTLLDACKRSVEHDLAIVKSTWCTQGVSIVSDG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain