SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene162148

Length: 202 nt

UniGene Fasta

>sp_v3.0_unigene162148
AATCTGGTGGAGGCATCGGATCCAAAGCTGGGGAAGGCATATGATGTGAGCGAGATGGAGAAGGTACTGAAATTGGGGCTGTTGTGCTCTCATCCAGAGCCGGAGTGCAGGCTCGGTATGCGCCATGTTTGCCAGATACTGGAAAACGAAGCTCCTCTACCTGACCTCTGCACGGCTTCGTATAAAGTAAGTATTATGGGCC

Ace file of the UniGene sp_v3.0_unigene162148

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Kinase, putative n=1 Tax=Ricinus communis RepID=B9T8H0_RICCO	-	-	4.0e-11	55%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	74%

Source	GOs	Term	Type	Identity
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	sugar binding	GO:0005529	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Legume lectin domain	IPR001220	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Concanavalin A-like lectin/glucanase, subgroup	IPR013320	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT4G02410.1	Concanavalin A-like lectin protein kinase family protein chr4:1060086-1062110 REVERSE LENGTH=674	3.0e-15	51%
RefSeq	Arabidopsis thaliana	NP_567233.1	concanavalin A-like lectin kinase-like protein [Arabidopsis thaliana]	4.0e-15	51%
RefSeq	Populus trichocarpa	XP_002309076.1	predicted protein [Populus trichocarpa]	8.0e-16	58%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLJ6

Fln msg: Distance to subject end: 65 aas, your sequence is shorter than subject: 67 - 704

Fln protein: NLVEASDPKLGKAYDVSEMEKVLKLGLLCSHPEPECRLGMRHVCQILENEAPLPDLCTASYKVSIMG

Protein Length: 68

Fln nts: AATCTGGTGGAGGCATCGGATCCAAAGCTGGGGAAGGCATATGATGTGAGCGAGATGGAGAAGGTACTGAAATTGGGGCTGTTGTGCTCTCATCCAGAGCCGGAGTGCAGGCTCGGTATGCGCCATGTTTGCCAGATACTGGAAAACGAAGCTCCTCTACCTGACCTCTGCACGGCTTCGTATAAAGTAAGTATTATGGGCC

Fln Alignment:

HA8LWWM01A30XE___LVEASDPKLGKAYDVSEMEKVLKLGLLCSHPEPECRLGMRHVCQILENEAPLPDLCTASYKVSIMG
B8LLJ6________________LVDASDPNLGKAYDMCQIEKVLKLGLLCCNPEPQSRLGMRHVCQILEGEAPLPDLRMASFNACIMG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain