UniGene Name: sp_v3.0_unigene156660
Length: 232 nt
This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense
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>sp_v3.0_unigene156660
C |
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Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FB24_FLAJ1 | - | - | 5.0e-35 | 96% |
FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 80% |
Sma3 | Glyceraldehyde-3-phosphate dehydrogenase | - | - | 2.773e-34 | - |
Source | ECs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating). | EC:1.2.1.12 | - | 9.344e-38 | - |
Source | KEGGs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Glycolysis / Gluconeogenesis | 00010 | 9.344e-38 | % | |
Sma3 | Biosynthesis of phenylpropanoids | 01061 | 9.344e-38 | % | |
Sma3 | Biosynthesis of terpenoids and steroids | 01062 | 9.344e-38 | % | |
Sma3 | Biosynthesis of alkaloids derived from shikimate pathway | 01063 | 9.344e-38 | % | |
Sma3 | Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid | 01064 | 9.344e-38 | % | |
Sma3 | Biosynthesis of alkaloids derived from histidine and purine | 01065 | 9.344e-38 | % | |
Sma3 | Biosynthesis of alkaloids derived from terpenoid and polyketide | 01066 | 9.344e-38 | % | |
Sma3 | Biosynthesis of plant hormones | 01070 | 9.344e-38 | % | |
Sma3 | Metabolic pathways | 01100 | 9.344e-38 | % | |
Sma3 | Biosynthesis of secondary metabolites | 01110 | 9.344e-38 | % |
Source | Gene names |
---|---|
Sma3 | AT1G13440; At1g13440; At3g04120; FaGAPDH; G3PDH; GAPC; GAPC1; GAPC2; GAPC3; GAPDH; GAPDHc; GPC; GPC1; GPC2; GPC3; GPDA; GSVIVT00035097001; GapC2; OJ000223_09.15; OJ1791_B03.34; Os02g0601300; Os04g0486600; OsI_026680; OsI_07948; OsI_16384; OsJ_07411; OsJ_1 |
Source | GOs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | cell wall | GO:0005618 | Cellular Component | 0.0 | - |
Sma3 | nucleus | GO:0005634 | Cellular Component | 0.0 | - |
Sma3 | cytoplasm | GO:0005737 | Cellular Component | 0.0 | - |
Sma3 | mitochondrial envelope | GO:0005740 | Cellular Component | 0.0 | - |
Sma3 | cytosol | GO:0005829 | Cellular Component | 0.0 | - |
Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
Sma3 | chloroplast | GO:0009507 | Cellular Component | 0.0 | - |
Sma3 | apoplast | GO:0048046 | Cellular Component | 0.0 | - |
Sma3 | glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | GO:0004365 | Molecular Function | 0.0 | - |
Sma3 | triose-phosphate isomerase activity | GO:0004807 | Molecular Function | 0.0 | - |
Sma3 | NAD binding | GO:0051287 | Molecular Function | 0.0 | - |
Sma3 | glucose metabolic process | GO:0006006 | Biological Process | 0.0 | - |
Sma3 | glycolysis | GO:0006096 | Biological Process | 0.0 | - |
Sma3 | oxidation-reduction process | GO:0055114 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | IPR000173 | - | 0.0 | - | |
Sma3 | Triosephosphate isomerase | IPR000652 | - | 0.0 | - |
Sma3 | Glyceraldehyde-3-phosphate dehydrogenase, type I | IPR006424 | - | 0.0 | - |
Sma3 | Aldolase-type TIM barrel | IPR013785 | - | 0.0 | - |
Sma3 | NAD(P)-binding domain | IPR016040 | - | 0.0 | - |
Sma3 | CS domain | IPR017447 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
---|---|---|---|---|---|
ATG | Arabidoptis thaliana | AT3G04120.1 | GAPC, GAPC-1, GAPC1 glyceraldehyde-3-phosphate dehydrogenase C subunit 1 chr3:1081077-1083131 FORWARD LENGTH=338 | 2.0e-35 | 79% |
RefSeq | Arabidopsis thaliana | NP_172801.1 | glyceraldehyde 3-phosphate dehydrogenase [Arabidopsis thaliana] | 3.0e-35 | 79% |
RefSeq | Populus trichocarpa | XP_002315632.1 | predicted protein [Populus trichocarpa] | 1.0e-34 | 85% |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: A9NVF3
Fln msg: Distance to subject end: 56 aas, your sequence is shorter than subject: 77 - 289
Fln protein:
H
Protein Length:
78
Fln nts:
C
Fln Alignment:
HLKU4M004IS30A___HETAQASDL-VVSNASCTTNCLAPLAKVINDNFGIVEGLMTTVHATTSTQMTADGPSRKDWRGGRAAAINIIPSSTGA
A9NVF3________________NEHQYKSDLNIVSNASCTTNCLAPLAKVINDKFGIVEGLMTTVHATTATQKTVDGPSNKDWRGGRGAGFNIIPSSTGA
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain