UniGene Name: sp_v3.0_unigene155880
Length: 248 nt
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>sp_v3.0_unigene155880
A |
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Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | L1P family of ribosomal proteins containing protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q22UX9_TETTH | - | - | 7.0e-18 | 70% |
FL-Next | sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 53% |
Sma3 | Ribosomal protein L1 | - | - | 9.227e-25 | - |
Source | Gene names |
---|---|
Sma3 | At5g22440; MWD9.24; OJ1150_A11.31; Os08g0558000; Os08g0558800; OsI_30253; OsI_30261; OsJ_28264; OsJ_28271; PHYPADRAFT_110650; RCOM_1281590; RCOM_1281610; RPL10AC; r10a; |
Source | GOs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | nucleolus | GO:0005730 | Cellular Component | 0.0 | - |
Sma3 | ribosome | GO:0005840 | Cellular Component | 0.0 | - |
Sma3 | cytosolic large ribosomal subunit | GO:0022625 | Cellular Component | 0.0 | - |
Sma3 | RNA binding | GO:0003723 | Molecular Function | 0.0 | - |
Sma3 | structural constituent of ribosome | GO:0003735 | Molecular Function | 0.0 | - |
Sma3 | RNA processing | GO:0006396 | Biological Process | 0.0 | - |
Sma3 | translation | GO:0006412 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Glutaredoxin | IPR002109 | - | 0.0 | - |
Sma3 | Ribosomal protein L1 | IPR002143 | - | 0.0 | - |
Sma3 | Glutaredoxin active site | IPR011767 | - | 0.0 | - |
Sma3 | Ribosomal protein L1, 2-layer alpha/beta-sandwich | IPR016094 | - | 0.0 | - |
Sma3 | Ribosomal protein L1, 3-layer alpha/beta-sandwich | IPR016095 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
---|---|---|---|---|---|
ATG | Arabidoptis thaliana | AT5G22440.1 | Ribosomal protein L1p/L10e family chr5:7435328-7436486 REVERSE LENGTH=217 | 2.0e-18 | 53% |
RefSeq | Arabidopsis thaliana | NP_001078612.1 | 60S ribosomal protein L10a-3 [Arabidopsis thaliana] | 3.0e-18 | 53% |
RefSeq | Populus trichocarpa | XP_002328253.1 | predicted protein [Populus trichocarpa] | 1.0e-17 | 60% |
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Fln status: N-terminus
Fln database: coniferopsida.fasta
Fln subject: A9NNS9
Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 139 aas, your sequence is shorter than subject: 72 - 216
Fln protein:
M
Protein Length:
73
Fln nts:
A