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UniGene Name: sp_v3.0_unigene149501
Length: 193 nt
 UniGene Fasta
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| >sp_v3.0_unigene149501
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Ace file of the UniGene sp_v3.0_unigene149501
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If you push the Download ace button, you will download an ace file of this UniGene.
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| Annotations |
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| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | Xyloglucan galactosyltransferase KATAMARI1 n=4 Tax=Arabidopsis RepID=KATAM_ARATH | - | - | 9.0e-16 | 67% |
| FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 61% |
| Sma3 | Putative exostosin family protein | - | - | 3.816e-12 | - |
| Source | Gene names |
|---|---|
| Sma3 | AT2G20370; At2g20370; At2g29040; At2g32740; At4g13990; F11A3.8; GSVIVT00024302001; GSVIVT00028497001; GSVIVT00033532001; KAM1; LOC_Os03g05060; LOC_Os03g05070; LOC_Os03g05110; LOC_Os10g32080; LOC_Os10g32160; LOC_Os10g32170; MUR3; OJ1172F09.2; OJ1172F09.3; |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | cell wall | GO:0005618 | Cellular Component | 0.0 | - |
| Sma3 | Golgi apparatus | GO:0005794 | Cellular Component | 0.0 | - |
| Sma3 | membrane | GO:0016020 | Cellular Component | 0.0 | - |
| Sma3 | integral to membrane | GO:0016021 | Cellular Component | 0.0 | - |
| Sma3 | integral to Golgi membrane | GO:0030173 | Cellular Component | 0.0 | - |
| Sma3 | peptidase activity | GO:0008233 | Molecular Function | 0.0 | - |
| Sma3 | transferase activity, transferring glycosyl groups | GO:0016757 | Molecular Function | 0.0 | - |
| Sma3 | signal peptide processing | GO:0006465 | Biological Process | 0.0 | - |
| Sma3 | proteolysis | GO:0006508 | Biological Process | 0.0 | - |
| Sma3 | unidimensional cell growth | GO:0009826 | Biological Process | 0.0 | - |
| Sma3 | salicylic acid mediated signaling pathway | GO:0009863 | Biological Process | 0.0 | - |
| Sma3 | xyloglucan biosynthetic process | GO:0009969 | Biological Process | 0.0 | - |
| Sma3 | endomembrane system organization | GO:0010256 | Biological Process | 0.0 | - |
| Sma3 | fucose biosynthetic process | GO:0042353 | Biological Process | 0.0 | - |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Peptidase S26B, eukaryotic signal peptidase | IPR001733 | - | 0.0 | - |
| Sma3 | Exostosin-like | IPR004263 | - | 0.0 | - |
| Sma3 | Peptidase S24/S26A/S26B | IPR019759 | - | 0.0 | - |
| Source | Species | ID | Description | e value | Identity |
|---|---|---|---|---|---|
| ATG | Arabidoptis thaliana | AT2G20370.1 | KAM1, MUR3 Exostosin family protein chr2:8792355-8794214 FORWARD LENGTH=619 | 5.0e-21 | 67% |
| RefSeq | Arabidopsis thaliana | NP_179627.2 | xyloglucan galactosyltransferase KATAMARI1 [Arabidopsis thaliana] | 6.0e-21 | 67% |
| RefSeq | Populus trichocarpa | XP_002301846.1 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] | 3.0e-20 | 64% |
| Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: A9NT31
Fln msg: Distance to subject end: 62 aas, your sequence is shorter than subject: 64 - 155
Fln protein:
K
Protein Length:
65
Fln nts:
C
Fln Alignment:
HIF1XHV02D35BP___RRSIFDSMLAGCIPVFFTEHSGYTQYKWHLPQNRSSYSVYIPEE
A9NT31________________RRSTFDALIAGCIPVFFRRDSAYEQYTWHLPSDPETYSVFIAEE
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
