SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene148018

Length: 229 nt

UniGene Fasta

>sp_v3.0_unigene148018
AAATTCGGTTATTCGTCTGGGAATTGGGGTTTTTCCAGGGCAGCAAAGGAGAATTTTGCCAGTTTCTCTTTCTCTAAATTTGACTACGGTGGTTGTTGTGAGATACAGGTACTACTGCTGGACGAGCCGACGAGCGCCCTGGATCCCATATCGACTGAGCACATCGAGGAGTCGATCGGGAAGCTGAGGAGGGAGAAGGGGATGACAATTATCATGGTTTCGCACAGCA

Ace file of the UniGene sp_v3.0_unigene148018

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ABC transporter-like protein (Fragment) n=1 Tax=Picea sitchensis RepID=E0ZFE7_PICSI	-	-	3.0e-12	88%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	88%

Source	Gene names
Sma3	At1g67940; GSVIVT00031325001; NAP3; Os06g0695800; OsI_24312; OsJ_22488; P0622F03.26; PHYPADRAFT_134304; RCOM_1381510; STAR1; T23K23.21; VITISV_010974; ppabci1;

Source	GOs	Term	Type	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	inorganic phosphate transmembrane transporter activity	GO:0005315	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	ATPase activity	GO:0016887	Molecular Function	-
Sma3	phosphate ion transport	GO:0006817	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	ABC transporter-like	IPR003439	-	-
Sma3	AAA+ ATPase domain	IPR003593	-	-
Sma3	Phosphate transport system permease protein 1	IPR005670	-	-
Sma3	ABC transporter, conserved site	IPR017871	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G67940.1	ATNAP3, AtSTAR1, NAP3 non-intrinsic ABC protein 3 chr1:25477805-25478667 FORWARD LENGTH=263	5.0e-13	67%
RefSeq	Arabidopsis thaliana	NP_176961.1	ABC transporter I family member 17 [Arabidopsis thaliana]	6.0e-13	67%
RefSeq	Populus trichocarpa	XP_002325227.1	predicted protein [Populus trichocarpa]	9.0e-13	62%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5ADF3

Fln msg: Distance to subject end: 44 aas, your sequence is shorter than subject: 76 - 268

Fln protein: KFGYSSGNWGFSRAAKENFASFSFSKFDYGGCCEIQVLLLDEPTSALDPISTEHIEESIGKLRREKGMTIIMVSHS

Protein Length: 77

Fln nts: AAATTCGGTTATTCGTCTGGGAATTGGGGTTTTTCCAGGGCAGCAAAGGAGAATTTTGCCAGTTTCTCTTTCTCTAAATTTGACTACGGTGGTTGTTGTGAGATACAGGTACTACTGCTGGACGAGCCGACGAGCGCCCTGGATCCCATATCGACTGAGCACATCGAGGAGTCGATCGGGAAGCTGAGGAGGGAGAAGGGGATGACAATTATCATGGTTTCGCACAGCA

Fln Alignment:

HLKU4M001BW1HD___EIQVLLLDEPTSALDPISTEHIEESIGKLRREKGMTIIMVSHS
D5ADF3________________EPEVLLLDEPTSALDPISTQHIEESIGKLKRGKGMTIIMVSHS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain