SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene145161

Length: 1069 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene145161 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Contains similarity to protein phosphatase 2C from Arabidopsis thaliana gb\|AF085279. It contains a protein phosphatase 2C domain PF\|00481	-	-	0.0	47%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	80%
Sma3	Protein phosphatase 2c, putative	-	-	7.479e-10	-

Source	ECs	Term	Type	e value	Identity
Sma3	Phosphoprotein phosphatase.	EC:3.1.3.16	-	6.068e-18	-

Source	Gene names
Sma3	ACRE284; AP3_H09.2; At1g07160; At2g30020; At2g40180; At3g27140; At4g08260; F10K1.13; F23F1.6; GSVIVT00024072001; GSVIVT00029318001; GSVIVT00030762001; LOC_Os03g18150; LOC_Os05g49730; LOC_Os12g09640; MP2C; MYF5.1; NbP2C; OJ1735_C10.11; Os03g0292100; Os05g0

Source	GOs	Term	Type	Identity
Sma3	protein serine/threonine phosphatase complex	GO:0008287	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	magnesium ion binding	GO:0000287	Molecular Function	-
Sma3	catalytic activity	GO:0003824	Molecular Function	-
Sma3	protein serine/threonine phosphatase activity	GO:0004722	Molecular Function	-
Sma3	manganese ion binding	GO:0030145	Molecular Function	-
Sma3	protein dephosphorylation	GO:0006470	Biological Process	-
Sma3	response to wounding	GO:0009611	Biological Process	-
Sma3	defense response to fungus	GO:0050832	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein phosphatase 2C, manganese/magnesium aspartate binding site	IPR000222	-	-
Sma3	Protein phosphatase 2C-like	IPR001932	-	-
Sma3	Phosphopantetheine attachment site	IPR006162	-	-
Sma3	Protein of unknown function DUF868, plant	IPR008586	-	-
Sma3		IPR014045	-	-
Sma3	Protein phosphatase 2C	IPR015655	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT2G40180.1	ATHPP2C5, PP2C5 phosphatase 2C5 chr2:16782522-16784014 FORWARD LENGTH=390	49%
RefSeq	Arabidopsis thaliana	NP_181547.1	putative protein phosphatase 2C 30 [Arabidopsis thaliana]	49%
RefSeq	Populus trichocarpa	XP_002298484.1	predicted protein [Populus trichocarpa]	54%

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
675	25	75			0.996473
676		66	33		0.997461

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain