SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene145041

Length: 232 nt

UniGene Fasta

>sp_v3.0_unigene145041
GAAAAGCCGAGCTTGAAATACGACTTCTGAATCCCTTCGTCACTAGCCCAGAAGGGCTTCAAAAGTCGTATTTCAAGCTCGGTTTTTCACCATGACTCGCGGAAATCAGAGAGATCGTGACAGGGAGAGGGCTGCTGCCCGATCTGCTAAGGCAGGGAAGAACAAGGATGATGGCCTTACTCCTGAACAACGAAGAGAAAGAGATGCTAAGGCACTTCATCCTTGTTCTTCC

Ace file of the UniGene sp_v3.0_unigene145041

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	4F5 domain containing protein	-	-	2.0e-09	38%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%
Sma3	4F5 protein family protein	-	-	5.515e-13	-

Source	Gene names
Sma3	At3g24100; At4g13615; CHLREDRAFT_185062; OJ1657_H11.6; Os05g0407100; Os11g0425600; OsI_04876; OsI_17382; OsJ_04501; OsJ_18510; P0040B10.3; PHYPADRAFT_49913; PHYPADRAFT_65287; POPTRDRAFT_641924; RCOM_1019480; RCOM_1719540; VITISV_042513;

Source	InterPros	Term	Type	Identity
Sma3	Phosphate-induced protein 1	IPR006766	-	-
Sma3	Uncharacterised protein family SERF	IPR007513	-	-
Sma3	Aldehyde dehydrogenase, conserved site	IPR016160	-	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: C0PQU9

Fln msg: Distance to subject end: 21 aas, your sequence is shorter than subject: 47 - 68

Fln protein: MTRGNQRDRDRERAAARSAKAGKNKDDGLTPEQRRERDAKALHPCSS

Protein Length: 48

Fln nts: GAAAAGCCGAGCTTGAAATACGACTTCTGAATCCCTTCGTCACTAGCCCAGAAGGGCTTCAAAAGTCGTATTTCAAGCTCGGTTTTTCACC_-_ATGACTCGCGGAAATCAGAGAGATCGTGACAGGGAGAGGGCTGCTGCCCGATCTGCTAAGGCAGGGAAGAACAAGGATGATGGCCTTACTCCTGAACAACGAAGAGAAAGAGATGCTAAGGCACTTCATCCTTGTTCTTCC

Fln Alignment:

AllPine_a_rep_c116460___MTRGNQXXXXXXXXXXXXXXXGKNKDDGLTPEQRRERDAKAL
C0PQU9________________MTRGSQRDRDRERAATRTAKSGKNKDDGLTPEQRRERDAKAL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain