SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene143015

Length: 183 nt

UniGene Fasta

>sp_v3.0_unigene143015
CGTCGTGACCTTGGCTGTCACTCAGGGGATTATACGTGGATCAGTTGTTCATTCATGACCCTGATGGCTTCATGATCGAAATGTGTAATTGTGAGAATCTCCCTGTGGTGCCATTGACACCCACTTCTCATGGTTGCAGGTTTCCATTGGCCATTGATTCAAAGCTGCAGATGATGGATATGA

Ace file of the UniGene sp_v3.0_unigene143015

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	80%
Sma3	Lactoylglutathione lyase	-	-	8.295e-15	-

Source	Gene names
Sma3	AT1G15380; At1g15380; F9L1.33; GSVIVT00000378001; GSVIVT00000379001; GSVIVT00016866001; MtrDRAFT_AC148340g32v2; OSJNBa0011L07.2; OSJNBa0089K24.11; OSJNBa0091D06.24; Os01g0173600; Os04g0538900; Os05g0171900; OsI_16808; OsI_18636; OsJ_00566; OsJ_15616; OsJ_

Source	GOs	Term	Type	e value	Identity
Sma3	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	GO:0016702	Molecular Function	0.0	-
Sma3	lyase activity	GO:0016829	Molecular Function	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Glyoxalase/fosfomycin resistance/dioxygenase	IPR004360	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G15380.1	Lactoylglutathione lyase / glyoxalase I family protein chr1:5290955-5292287 FORWARD LENGTH=174	9.0e-13	80%
RefSeq	Arabidopsis thaliana	NP_001031049.1	lactoylglutathione lyase / glyoxalase I-like protein [Arabidopsis thaliana]	1.0e-12	80%
RefSeq	Populus trichocarpa	XP_002309802.1	predicted protein [Populus trichocarpa]	6.0e-13	57%

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NU68

Fln msg: Unexpected stop codon in the beginning of your sequence, STOP codon was not found. Distance to subject end: 4 aas, your sequence is shorter than subject: 60 - 170

Fln protein: S*PWLSLRGLYVDQLFIHDPDGFMIEMCNCENLPVVPLTPTSHGCRFPLAIDSKLQMMDM

Protein Length: 61

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGGGGATTATACGTGGATCAGTTGTTCATTCATGACCCTGATGGCTTCATGATCGAAATGTGTAATTGTGAGAATCTCCCTGTGGTGCCATTGACACCCACTTCTCATGGTTGCAGGTTTCCATTGGCCATTGATTCAAAGCTGCAGATGATGGATATGA

Fln Alignment:

AllPine_a_rep_c109237___GLYVDQLFIHDPDGFMIEMCNCENLPVVPLTPTSHGCRFPLAIDSKLQMMDM
A9NU68________________GLYVDQLFIHDPDGFMIEMCTCENLPVVPLASASPACRFPSAINSKLQMMNI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain