SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene137657

Length: 212 nt

UniGene Fasta

>sp_v3.0_unigene137657
AATGTGTGACGCGTGAAGATGGCTTGGGAAAGATTTGAACAGAAGAAATAAATATCCTTTCAGTAACACCTGATTGACTGAAACATTTCTGTTTTGGGATGGCGTCGCTGACCCCAGGAATACTATTGAAGCTCTTACAGCACATGAATTCTGATGTGAGGGTTGGTGGAGAGTACCGTTCGGTGTTGCTACAGGTCATCAGCATTGTACCT

Ace file of the UniGene sp_v3.0_unigene137657

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF936 domain containing protein	-	-	6.0e-16	77%
FL-Next	tr=Putative uncharacterized protein Sb07g025480; Sorghum bicolor (Sorghum) (Sorghum vulgare).	-	-	0.0	84%

Source	Gene names
Sma3	At1g08760; GSVIVT00010302001; GSVIVT00016797001; GSVIVT00034034001; LOC_Os03g08390; OJ1211_G06.22; OSJNBb0076N15.15; Os03g0181800; Os08g0541500; Os09g0516700; OsI_10268; OsI_30093; OsI_32047; OsJ_09663; OsJ_28131; OsJ_30017; PHYPADRAFT_101176; PHYPADRAFT_

Source	InterPros	Term	Type	e value	Identity
Sma3	Protein of unknown function DUF936, plant	IPR010341	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G08760.1	Plant protein of unknown function (DUF936) chr1:2805478-2808409 FORWARD LENGTH=748	1.0e-12	76%
RefSeq	Arabidopsis thaliana	NP_172353.1	uncharacterized protein [Arabidopsis thaliana]	1.0e-12	76%
RefSeq	Populus trichocarpa	XP_002304236.1	predicted protein, partial [Populus trichocarpa]	2.0e-13	84%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: tr_plants

Fln subject: C5YH97

Fln msg: Distance to subject end: 705 aas, your sequence is shorter than subject: 38 - 743

Fln protein: MASLTPGILLKLLQHMNSDVRVGGEYRSVLLQVISIVP

Protein Length: 39

Fln nts: AATGTGTGACGCGTGAAGATGGCTTGGGAAAGATTTGAACAGAAGAAATAAATATCCTTTCAGTAACACCTGATTGACTGAAACATTTCTGTTTTGGG_-_ATGGCGTCGCTGACCCCAGGAATACTATTGAAGCTCTTACAGCACATGAATTCTGATGTGAGGGTTGGTGGAGAGTACCGTTCGGTGTTGCTACAGGTCATCAGCATTGTACCT

Fln Alignment:

AllPine_a_rep_c95698___MASLTPGILLKLLQHMNSDVRVGGEYRSVLLQVISIVP
C5YH97________________MASLVPGVLLKLLQHMNSDVKVGGEHRSSLLQVVSIVP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain