SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene121085

Length: 499 nt

UniGene Fasta

>sp_v3.0_unigene121085
ATGGGGGAAGTATTCTGGACTCACGCAGTATCAGCGGCAAAGGTCTCTAAAGCCGCTCAGCTGTATCTTTCGGGTTAGCTTTGATTTAATGGCGTCTCTGCAAGTGAAGGTCACCAGAAAGGGGGCTGTCCTGGTTCCGCCATTGGCGCCTACTCCGAAAGAGTTTCTATACCTTTCCAATATCGATGATCAGGGAACTTTGAGATTTCATGTCCCCTTCTTTCAGTTCTATCGGTTCAACCCGTCGATGAAGGGTGAGGATCCCGCCAGGGTTATCAGAGAAGGGCTGGCCAAGGTTTTAGTATTCTACTACCCTTTGGCCGGAAGAGTCAGAGAGGCGCCCAGGGGTAAGCTCCTTGTCGAGTGTACGGGAGAAGGTGTGCTGTTTGTGGAAGCCGATGCGGACGTTGCTCTGGAGGAATTCGGAGACCAACTACCGTCCTTTTCCTGCTGGCGAGATCTGCTGCATGATGTGCCCGGCCTAGATACTATTACCTAA

Ace file of the UniGene sp_v3.0_unigene121085

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	pfam02458, Transferase, Transferase family	-	-	3.0e-29	38%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	77%
Sma3	Alcohol acyl transferase	-	-	7.942e-22	-

Source	ECs	Term	Type	e value	Identity
Sma3	Taxadien-5-alpha-ol O-acetyltransferase.	EC:2.3.1.162	-	1.757e-06	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Diterpenoid biosynthesis	00904		1.757e-06	%
Sma3	10-deacetylbaccatin III 10-O-acetyltransferase.	EC:2.3.1.167	-	1.076e-10	-

Source	KEGGs	Term	e value	Identity
Sma3	Diterpenoid biosynthesis	00904	1.076e-10	%
Sma3	Biosynthesis of terpenoids and steroids	01062	1.076e-10	%
Sma3	Metabolic pathways	01100	1.076e-10	%
Sma3	Biosynthesis of secondary metabolites	01110	1.076e-10	%

Source	Gene names
Sma3	AAT; AAT1; AAT2; AAT3; AT2; At3g03480; At5g17540; B1051E10.34; B1123E10.118; BAPT; CtAT23; DBAT; GSVIVT00001202001; GSVIVT00003212001; GSVIVT00003215001; GSVIVT00003217001; GSVIVT00003220001; GSVIVT00009436001; GSVIVT00013875001; GSVIVT00022386001; GSVIVT

Source	GOs	Term	Type	Identity
Sma3	alcohol O-acetyltransferase activity	GO:0004026	Molecular Function	-
Sma3		GO:0008415	Molecular Function	-
Sma3	acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase activity	GO:0010327	Molecular Function	-
Sma3	transferase activity, transferring acyl groups other than amino-acyl groups	GO:0016747	Molecular Function	-
Sma3	10-deacetylbaccatin III 10-O-acetyltransferase activity	GO:0050643	Molecular Function	-
Sma3	green leaf volatile biosynthetic process	GO:0010597	Biological Process	-
Sma3	paclitaxel biosynthetic process	GO:0042617	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Transferase	IPR003480	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G17540.1	HXXXD-type acyl-transferase family protein chr5:5782061-5783682 REVERSE LENGTH=461	3.0e-38	53%
RefSeq	Arabidopsis thaliana	NP_197256.1	HXXXD-type acyl-transferase-like protein [Arabidopsis thaliana]	4.0e-38	53%
RefSeq	Populus trichocarpa	XP_002325454.1	predicted protein [Populus trichocarpa]	0.0	64%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LLR5

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 311 aas, your sequence is shorter than subject: 137 - 448

Fln protein: MASLQVKVTRKGAVLVPPLAPTPKEFLYLSNIDDQGTLRFHVPFFQFYRFNPSMKGEDPARVIREGLAKVLVFYYPLAGRVREAPRGKLLVECTGEGVLFVEADADVALEEFGDQLPSFSCWRDLLHDVPGLDTIT*

Protein Length: 138

Fln nts: ATGGGGGAAGTATTCTGGACTCACGCAGTATCAGCGGCAAAGGTCTCTAAAGCCGCTCAGCTGTATCTTTCGGGTTAGCTTTGATTTA_-_ATGGCGTCTCTGCAAGTGAAGGTCACCAGAAAGGGGGCTGTCCTGGTTCCGCCATTGGCGCCTACTCCGAAAGAGTTTCTATACCTTTCCAATATCGATGATCAGGGAACTTTGAGATTTCATGTCCCCTTCTTTCAGTTCTATCGGTTCAACCCGTCGATGAAGGGTGAGGATCCCGCCAGGGTTATCAGAGAAGGGCTGGCCAAGGTTTTAGTATTCTACTACCCTTTGGCCGGAAGAGTCAGAGAGGCGCCCAGGGGTAAGCTCCTTGTCGAGTGTACGGGAGAAGGTGTGCTGTTTGTGGAAGCCGATGCGGACGTTGCTCTGGAGGAATTCGGAGACCAACTACCGTCCTTTTCCTGCTGGCGAGATCTGCTGCATGATGTGCCCGGCCTAGATACTATTACCTAA

Fln Alignment:

AllPine_a_c56984___MASLQVKVTRKGAVLVPPLAPTPKEFLYLSNIDDQGTLRFHVPFFQFYRFNPSMKGEDPARVIREGLAKVLVFYYPLAGRVREAPRGKLLVECTGEGVLFVEADADVALEEFGDQLPSFSCWRDLLHDVPGLDTIT
B8LLR5________________MATLQFKVTRKPAVLVAPSRPTPKEFLYLSNIDDQAGLRFHIPVVQFYQFDPSKKGEDPARVIREGLAKALVFYYPFAGRLRDAPAGKLVVDCTGEGVLFVEADADVALEEFGDLQPPFPCWEDLLHDVPASLTLT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain