SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene119843

Length: 169 nt

UniGene Fasta

>sp_v3.0_unigene119843
AGTTGTCAGTAAAAGTGGCAAAGCCGAAGCCGTTACAGAGGATCATAAAGCTGCAAGGAAGGACGAGCAAGAGCGCATACGAAAATTGGGGGGTATTGTGTTCAATTGCCAGGGAGTTATGCGACTTGGGGCATTGGATGTGTCGAGGGCAATAGGTGATGCAGGGTTA

Ace file of the UniGene sp_v3.0_unigene119843

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Probable protein phosphatase 2C 32 n=2 Tax=Oryza sativa RepID=P2C32_ORYSJ	-	-	5.0e-10	59%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	56%

Source	Gene names
Sma3	LOC_Os03g18150; NbP2C; Os03g0292100; OsI_11115; OsJ_10455;

Source	GOs	Term	Type	Identity
Sma3	protein serine/threonine phosphatase complex	GO:0008287	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	magnesium ion binding	GO:0000287	Molecular Function	-
Sma3	protein serine/threonine phosphatase activity	GO:0004722	Molecular Function	-
Sma3	manganese ion binding	GO:0030145	Molecular Function	-
Sma3	protein dephosphorylation	GO:0006470	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein phosphatase 2C, manganese/magnesium aspartate binding site	IPR000222	-	-
Sma3	Protein phosphatase 2C-like	IPR001932	-	-
Sma3		IPR014045	-	-
Sma3	Protein phosphatase 2C	IPR015655	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G67820.1	Protein phosphatase 2C family protein chr1:25429882-25431484 FORWARD LENGTH=445	1.0e-11	56%
RefSeq	Arabidopsis thaliana	NP_176948.2	putative protein phosphatase 2C 14 [Arabidopsis thaliana]	2.0e-11	56%
RefSeq	Populus trichocarpa	XP_002311236.1	predicted protein [Populus trichocarpa]	8.0e-13	54%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LKN4

Fln msg: Distance to subject end: 95 aas, your sequence is shorter than subject: 56 - 449

Fln protein: VVSKSGKAEAVTEDHKAARKDEQERIRKLGGIVFNCQGVMRLGALDVSRAIGDAGL

Protein Length: 57

Fln nts: AGTTGTCAGTAAAAGTGGCAAAGCCGAAGCCGTTACAGAGGATCATAAAGCTGCAAGGAAGGACGAGCAAGAGCGCATACGAAAATTGGGGGGTATTGTGTTCAATTGCCAGGGAGTTATGCGACTTGGGGCATTGGATGTGTCGAGGGCAATAGGTGATGCAGGGTTA

Fln Alignment:

AllPine_a_c55447___VVSKSGKAEAVTEDHKAARKDEQERIRKLGGIVFNCQGVMRL-GALDVSRAIGDA
B8LKN4________________VISRDGASEALTCDHRAGREDERQRIENLGGIVDLRHGVWRVQGSLAVSRAIGDS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain