SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene119680

Length: 456 nt

UniGene Fasta

>sp_v3.0_unigene119680
CTTCCTGAGTCGATCGAGACCCTTCCCACCGTCTTCGTCATTCCTGATAGAATCACTGAAGCACGTCGACAACGTTCCGCTAGTGGTGATAGTTCACCATCATCATACCCCGTCGTTGCCCTTGGCGGCACTTTCGATCATTTACATGCAGGCCACAAGATTCTCCTTAGCATGGCAGCATGGATAGCTGGTAGCAAAGTCATCGTTGGTGTCACCGACGACGAGCTGCTGAAGAATAAATCGAATAAACATGTCCTGGAGCCAATAAACCTGCGCATGGAGAGAACTCGTTCTTTCCTCAAGCTCTTCCGCCCTGATCTTGAGTATGAAGTTGTACCAATACGGGACGTGTATGGCCCTACTGGTTGGGATCCCGATATTCAGGCGCTGATAGTTAGCATAGAGACTCTACCTGGAGCAGCAGCAATCGACAAGAAACGCGCCGCCAAGTCGTTA

Ace file of the UniGene sp_v3.0_unigene119680

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	CTP_transf_2 domain containing protein	-	-	6.0e-09	24%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	42%

Source	Gene names
Sma3	CHLREDRAFT_117035;

Source	GOs	Term	Type	Identity
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	nucleotidyltransferase activity	GO:0016779	Molecular Function	-
Sma3	biosynthetic process	GO:0009058	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Dephospho-CoA kinase	IPR001977	-	-
Sma3	Cytidylyltransferase	IPR004820	-	-
Sma3	Cytidyltransferase-related	IPR004821	-	-

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NYQ7

Fln msg: Distance to subject end: 62 aas, W2: There is no M at the beginning, your sequence is shorter than subject: 152 - 194

Fln protein: LPESIETLPTVFVIPDRITEARRQRSASGDSSPSSYPVVALGGTFDHLHAGHKILLSMAAWIAGSKVIVGVTDDELLKNKSNKHVLEPINLRMERTRSFLKLFRPDLEYEVVPIRDVYGPTGWDPDIQALIVSIETLPGAAAIDKKRAAKSL

Protein Length: 153

Fln nts: CTTCCTGAGTCGATCGAGACCCTTCCCACCGTCTTCGTCATTCCTGATAGAATCACTGAAGCACGTCGACAACGTTCCGCTAGTGGTGATAGTTCACCATCATCATACCCCGTCGTTGCCCTTGGCGGCACTTTCGATCATTTACATGCAGGCCACAAGATTCTCCTTAGCATGGCAGCATGGATAGCTGGTAGCAAAGTCATCGTTGGTGTCACCGACGACGAGCTGCTGAAGAATAAATCGAATAAACATGTCCTGGAGCCAATAAACCTGCGCATGGAGAGAACTCGTTCTTTCCTCAAGCTCTTCCGCCCTGATCTTGAGTATGAAGTTGTACCAATACGGGACGTGTATGGCCCTACTGGTTGGGATCCCGATATTCAGGCGCTGATAGTTAGCATAGAGACTCTACCTGGAGCAGCAGCAATCGACAAGAAACGCGCCGCCAAGTCGTTA

Fln Alignment:

AllPine_a_c55234___YPVVALGGTFDHLHAGHKILLSMAAWIAGSKVIVGVTDDELLKNKSNKHVLEPINLRMERTRSFLKLFRPDLEYEVVPIRDVYGPTGWDPDIQALIVSIETLPGAAAIDKKRAAKSL
A9NYQ7________________YDAVVLGGTFDRLHDGHRRLLKAAAELARVRVVVGVCTGPMLENKELAHLIEPVEKRIKAIENYIKSIKPGLVVQAEPITDPYGPSIVDEDLEAIVVSKETLAGGLSVNKRRAERGL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain