SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene119411

Length: 184 nt

UniGene Fasta

>sp_v3.0_unigene119411
GCAGAACGCATTGGACGTGAAGCAGAGCGGAGGTGTTGTCAAGCTCTGGTAGTTTCAATGGAAGATTTTGATGTGCGATGTCTACCAAATGAAGCTTTGGTGATTTTTGTGGTTTCAACCACTGGCCAAGGGGACTCACCAGATTCAATGAAGGCATTCTGGAAGTTTTTACTCATGAGGAGCC

Ace file of the UniGene sp_v3.0_unigene119411

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Nadph-cytochrome P450 oxydoreductase n=1 Tax=Populus trichocarpa RepID=B9H2Y5_POPTR	-	-	2.0e-17	72%
FL-Next	sp=NADPH-dependent diflavin oxidoreductase ATR3; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	69%

Source	Gene names
Sma3	ATR3; At3g02280; B1060H01.9; CHLREDRAFT_102893; F14P3.7; GSVIVT00038202001; NFR1; OSJNBb0036G09.20; Os01g0733600; OsI_03638; PHYPADRAFT_186100; POPTRDRAFT_714013; RCOM_0760860;

Source	GOs	Term	Type	Identity
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	FMN binding	GO:0010181	Molecular Function	-
Sma3	oxidoreductase activity	GO:0016491	Molecular Function	-

Source	InterPros	Term	Type	Identity
Sma3	Flavodoxin	IPR001094	-	-
Sma3	Oxidoreductase FAD/NAD(P)-binding	IPR001433	-	-
Sma3	Flavoprotein pyridine nucleotide cytochrome reductase	IPR001709	-	-
Sma3	FAD-binding, type 1	IPR003097	-	-
Sma3	Flavodoxin/nitric oxide synthase	IPR008254	-	-
Sma3	Ferredoxin reductase-type FAD-binding domain	IPR017927	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G02280.1	Flavodoxin family protein chr3:453646-457659 FORWARD LENGTH=623	4.0e-20	69%
RefSeq	Arabidopsis thaliana	NP_186877.2	flavodoxin-like protein [Arabidopsis thaliana]	5.0e-20	69%
RefSeq	Populus trichocarpa	XP_002305157.1	nadph-cytochrome P450 oxydoreductase [Populus trichocarpa]	5.0e-23	72%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q6NPS8

Fln msg: Distance to subject end: 539 aas, your sequence is shorter than subject: 61 - 623

Fln protein: AERIGREAERRCCQALVVSMEDFDVRCLPNEALVIFVVSTTGQGDSPDSMKAFWKFLLMRS

Protein Length: 62

Fln nts: GCAGAACGCATTGGACGTGAAGCAGAGCGGAGGTGTTGTCAAGCTCTGGTAGTTTCAATGGAAGATTTTGATGTGCGATGTCTACCAAATGAAGCTTTGGTGATTTTTGTGGTTTCAACCACTGGCCAAGGGGACTCACCAGATTCAATGAAGGCATTCTGGAAGTTTTTACTCATGAGGAGCC

Fln Alignment:

AllPine_a_c54891___AERIGREAERRCCQALVVSMEDFDVRCLPN-EALVIFVVSTTGQGDSPDSMKAFWKFLLMRS
Q6NPS8________________AERIGREAERRGLPASVVSTDEFDTSSLPHHEEAVVFVVSTTGQGDSPDSFKAFWRFLLQRN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain