SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene115137

Length: 198 nt

UniGene Fasta

>sp_v3.0_unigene115137
ATGGGGACAATTGCACAATCCGGGCATTAACATTATAAGCTCAATTGTAATTCCTTGTGTTGAAGTTACACTGTTTAAGCTGCTGCCTCGCCATTTGCAATGGGGCGAAGAACATGCGCAGCGTCCCTTTGGATCACAGCAATACTAACTTTATTAGCTGTTAATGTTTATCTGCAAGGTATAGAAGGTGCGACAATG

Ace file of the UniGene sp_v3.0_unigene115137

If you push the Download ace button, you will download an ace file of this UniGene.

To watch this ACE file you will need an ACE viewer program as Tablet:

Go to the Tablet ACE viewer Web

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Thaumatin-like protein n=1 Tax=Pinus taeda RepID=A5HIY3_PINTA	-	-	5.0e-10	96%
FL-Next	tr=Thaumatin-like protein; Pinus taeda (Loblolly pine).	-	-	0.0	96%

Source	Gene names
Sma3	THN;

Source	InterPros	Term	Type	e value	Identity
Sma3	Thaumatin, pathogenesis-related	IPR001938	-	0.0	-
Sma3	Thaumatin, conserved site	IPR017949	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A5HIY3

Fln msg: Distance to subject end: 201 aas, your sequence is shorter than subject: 33 - 234

Fln protein: MGRRTCAASLWITAILTLLAVNVYLQGIEGATM

Protein Length: 34

Fln nts: ATGGGGACAATTGCACAATCCGGGCATTAACATTATAAGCTCAATTGTAATTCCTTGTGTTGAAGTTACACTGTTTAAGCTGCTGCCTCGCCATTTGCA_-_ATGGGGCGAAGAACATGCGCAGCGTCCCTTTGGATCACAGCAATACTAACTTTATTAGCTGTTAATGTTTATCTGCAAGGTATAGAAGGTGCGACAATG

Fln Alignment:

AllPine_a_c49755___MGRRTCAASLWITAILTLLAVNVYLQGIEGATM
A5HIY3________________MGRRTCAASLWITAILTLLAVNVYVQGIEGATM

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain