SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene114510

Length: 395 nt

UniGene Fasta

>sp_v3.0_unigene114510
TCCAGTGCGGCCTCTCCCTCGAGTGCCTCGTCATGATATTATACAGGCAGTTCAATTGGGAAGCCGTGAATCCCTCTTGGCATTCTGTGGGGCTGTCCAAAGATGTTCTCCTGTGGGATCCTACATCAGGCCTGTAGCTGGTTCAACCCCTGGATATGCATCAGAGGTGCACTCATTTATACCAGAAATTAATTTTTGAGGAGTTTGAGGGTGTGAAAGCTGCAATACCTCAGTATTTTAGCTCTAGTGCTTTTTCTCAGGTAGTCTTTGCAGATGGCACATTCATAGATGGAAGTACAAGCGAGCTCTCATGTGATGGACCTTTGAGGGATCCATTTTCAGTCTTTTGCCAGGGATGTTCTCACTGGACACAATGGGCATTGGTTCTAGAAGAG

Ace file of the UniGene sp_v3.0_unigene114510

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Cys/Met metabolism pyridoxal-phosphate-dependent enzyme [Lyngbya sp. PCC 8106] gb\|EAW33331.1\| Cys/Met metabolism pyridoxal-phosphate-dependent enzyme [Lyngbya sp. PCC 8106]	-	-	4.0e-24	54%
FL-Next	tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida).	-	-	0.0	81%

Source	Gene names
Sma3	CHLREDRAFT_115040; GSVIVT00027605001; H0410G08.15; OSJNBb0034I13.3; Os04g0636300; OsI_17585; OsJ_16322; PHYPADRAFT_224516; POPTRDRAFT_823015; RCOM_0380550; VITISV_020967;

Source	GOs	Term	Type	e value	Identity
Sma3	catalytic activity	GO:0003824	Molecular Function	0.0	-
Sma3	pyridoxal phosphate binding	GO:0030170	Molecular Function	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Organic solute transporter Ost-alpha	IPR005178	-	-
Sma3	Aluminium resistance	IPR009651	-	-
Sma3	Pyridoxal phosphate-dependent transferase, major region, subdomain 1	IPR015421	-	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002316930.1	predicted protein [Populus trichocarpa]	8.0e-38	81%

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: tr_plants

Fln subject: I1LT06

Fln msg: Separated hits, possible frame ERROR between 169 and 273, STOP codon was not found. Distance to subject end: 5 aas, your sequence is shorter than subject: 132 - 257

Fln protein: PVRPLPRVPRHDIIQAVQLGSRESLLAFCGAVQRCSPVGSYIRPVAGSTPGYASExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxDGTFIDGSTSELSCDGPLRDPFSVFCQGCSHWTQWALVLEE

Protein Length: 133

Fln nts: TCCAGTGCGGCCTCTCCCTCGAGTGCCTCGTCATGATATTATACAGGCAGTTCAATTGGGAAGCCGTGAATCCCTCTTGGCATTCTGTGGGGCTGTCCAAAGATGTTCTCCTGTGGGATCCTACATCAGGCCTGTAGCTGGTTCAACCCCTGGATATGCATCAGAGGTxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGATGGCACATTCATAGATGGAAGTACAAGCGAGCTCTCATGTGATGGACCTTTGAGGGATCCATTTTCAGTCTTTTGCCAGGGATGTTCTCACTGGACACAATGGGCATTGGTTCTAGAAGAG

Fln Alignment:

AllPine_a_c48961___VRPLPRVPRHDIIQAVQLGSRESLLAFCGAVQRCSPVGSYIRPVAGSTPGYASEVxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxDGTFIDGSTSELSCDGPLRDPFSVFCQGCSHWTQWALVLEE
I1LT06________________VQPLPRVPRSDTVQAVQLGSREHLLAFCEAVQRSSPVGSYTKPVAGATPGYASEVxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxDGTFIDGSTSELSCDGPLREPFAVFCQGGTHWTQWGLVLGE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain