SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene111372

Length: 148 nt

UniGene Fasta

>sp_v3.0_unigene111372
TCTTCGATGGGATTGCTGGAGTAATGGGCACATGCTTCTCAGTGCCAATTCGTATGGCATTAGAACAACCTGGCGATCAAATTCTTGGGCAACGGAGAAAGCAGAGGTATAAGTGGAGATTTGATCGAGACTTCAATTATATACGCAA

Ace file of the UniGene sp_v3.0_unigene111372

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Cytochrome c oxidase subunit 1 (Fragment) n=6 Tax=Pinaceae RepID=B5LDZ3_PICGL	-	-	5.0e-06	86%
FL-Next	sp=Cytochrome c oxidase subunit 1; Triticum aestivum (Wheat). Mitochondrion.	-	-	0.0	79%

Source	Gene names
Sma3	COI; cox1;

Source	GOs	Term	Type	Identity
Sma3	mitochondrion	GO:0005739	Cellular Component	-
Sma3	mitochondrial inner membrane	GO:0005743	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	cytochrome-c oxidase activity	GO:0004129	Molecular Function	-
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	heme binding	GO:0020037	Molecular Function	-
Sma3	aerobic respiration	GO:0009060	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Cytochrome c oxidase, subunit I	IPR000883	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: P68539

Fln msg: Distance to subject end: 453 aas, your sequence is shorter than subject: 48 - 524

Fln protein: FDGIAGVMGTCFSVPIRMALEQPGDQILGQRRKQRYKWRFDRDFNYIR

Protein Length: 49

Fln nts: TCTTCGATGGGATTGCTGGAGTAATGGGCACATGCTTCTCAGTGCCAATTCGTATGGCATTAGAACAACCTGGCGATCAAATTCTTGGGCAACGGAGAAAGCAGAGGTATAAGTGGAGATTTGATCGAGACTTCAATTATATACGCAA

Fln Alignment:

AllPine_a_c45093___FDGIAGVMGTCFSVPIRMALEQPGDQILG
P68539________________FGAIAGVMGTCFSVLIRMELARPGDQILG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain