SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene99176

Length: 935 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene99176 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative S-acyltransferase [Arabidopsis thaliana] sp\|Q7XA86.1\|ZDH11_ARATH RecName: Full=Probable S-acyltransferase At3g51390; AltName: Full=Probable palmitoyltransferase At3g51390; AltName: Full=Zinc finger DHHC domain-containing protein At3g51390 gb\|AAQ2	-	-	1.00053e-42	45%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	38%

Source	Gene names
Sma3	At3g51390; F26O13.30; GSVIVT00011882001; LOC_Os12g29560; Os12g0480000; OsI_38321; OsJ_15777; OsJ_36085; PHYPADRAFT_130130; POPTRDRAFT_1111401; RCOM_0728630;

Source	GOs	Term	Type	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	zinc ion binding	GO:0008270	Molecular Function	-
Sma3		GO:0008415	Molecular Function	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Zinc finger, DHHC-type, palmitoyltransferase	IPR001594	-	0.0	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT3G51390.1	DHHC-type zinc finger family protein chr3:19075718-19077966 FORWARD LENGTH=340	45%
RefSeq	Arabidopsis thaliana	NP_566950.1	putative S-acyltransferase [Arabidopsis thaliana]	45%
RefSeq	Populus trichocarpa	XP_002327715.1	predicted protein [Populus trichocarpa]	45%

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	C %	G %	T %	Probability
893	66	33		0.997476
895	33		66	0.997476
896	33		66	0.997476

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain