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UniGene Name: sp_v3.0_unigene81398
Length: 154 nt
This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense
 UniGene Fasta (sense)
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| >sp_v3.0_unigene81398
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Ace file of the UniGene sp_v3.0_unigene81398 (antisense)
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If you push the Download ace button, you will download an ace file of this UniGene.
To watch this ACE file you will need an ACE viewer program as Tablet:
Go to the Tablet ACE viewer Web
| Annotations |
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| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL | - | - | 2.0e-17 | 86% |
| FL-Next | tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). | - | - | 0.0 | 86% |
| Sma3 | Receptor protein kinase CLAVATA1, putative | - | - | 2.16e-15 | - |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | 2-alkenal reductase. | EC:1.3.1.74 | - | 9.206e-11 | - |
| Sma3 | Mitogen-activated protein kinase kinase kinase. | EC:2.7.11.25 | - | 7.471e-16 | - |
| Source | Gene names |
|---|---|
| Sma3 | AT1G28440; AT1G75820; AT3G49670; AT4G28490; AT5G63930; AT5G65700; At1g17230; At1g17230/F20D23_7; At1g28440; At1g75820; At3g49670; At4g28490; At5g63930; At5g65700; CLAVATA1; CLL1A; CLL1B; CLL3; CLV; CLV1; CLV1A; CLV1B; CM0216.560.nc; F20D23.7; F21O9.180; F |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
| Sma3 | integral to membrane | GO:0016021 | Cellular Component | 0.0 | - |
| Sma3 | protein serine/threonine kinase activity | GO:0004674 | Molecular Function | 0.0 | - |
| Sma3 | receptor activity | GO:0004872 | Molecular Function | 0.0 | - |
| Sma3 | protein binding | GO:0005515 | Molecular Function | 0.0 | - |
| Sma3 | ATP binding | GO:0005524 | Molecular Function | 0.0 | - |
| Sma3 | oxidoreductase activity | GO:0016491 | Molecular Function | 0.0 | - |
| Sma3 | identical protein binding | GO:0042802 | Molecular Function | 0.0 | - |
| Sma3 | protein phosphorylation | GO:0006468 | Biological Process | 0.0 | - |
| Sma3 | regulation of meristem structural organization | GO:0009934 | Biological Process | 0.0 | - |
| Sma3 | regulation of meristem growth | GO:0010075 | Biological Process | 0.0 | - |
| Sma3 | microsporocyte differentiation | GO:0010480 | Biological Process | 0.0 | - |
| Sma3 | cell differentiation | GO:0030154 | Biological Process | 0.0 | - |
| Sma3 | protein autophosphorylation | GO:0046777 | Biological Process | 0.0 | - |
| Sma3 | gametophyte development | GO:0048229 | Biological Process | 0.0 | - |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Protein kinase, catalytic domain | IPR000719 | - | 0.0 | - |
| Sma3 | Leucine-rich repeat | IPR001611 | - | 0.0 | - |
| Sma3 | Enolpyruvate transferase domain | IPR001986 | - | 0.0 | - |
| Sma3 | Short-chain dehydrogenase/reductase SDR | IPR002198 | - | 0.0 | - |
| Sma3 | Glucose/ribitol dehydrogenase | IPR002347 | - | 0.0 | - |
| Sma3 | Aminotransferases, class-I, pyridoxal-phosphate-binding site | IPR004838 | - | 0.0 | - |
| Sma3 | Retrotransposon gag protein | IPR005162 | - | 0.0 | - |
| Sma3 | Serine/threonine-protein kinase, active site | IPR008271 | - | 0.0 | - |
| Sma3 | Leucine-rich repeat-containing N-terminal, type 2 | IPR013210 | - | 0.0 | - |
| Sma3 | NAD(P)-binding domain | IPR016040 | - | 0.0 | - |
| Sma3 | Protein kinase, ATP binding site | IPR017441 | - | 0.0 | - |
| Sma3 | IPR017442 | - | 0.0 | - | |
| Sma3 | HTH domain AraC-type, conserved site | IPR018062 | - | 0.0 | - |
| Sma3 | Asp/Glu racemase, active site | IPR018187 | - | 0.0 | - |
| Source | Species | ID | Description | e value | Identity |
|---|---|---|---|---|---|
| ATG | Arabidoptis thaliana | AT3G49670.1 | BAM2 Leucine-rich receptor-like protein kinase family protein chr3:18417741-18420836 FORWARD LENGTH=1002 | 6.0e-17 | 72% |
| RefSeq | Arabidopsis thaliana | NP_190536.1 | receptor-like kinase BAM2 [Arabidopsis thaliana] | 8.0e-17 | 72% |
| RefSeq | Populus trichocarpa | XP_002328032.1 | predicted protein [Populus trichocarpa] | 9.0e-18 | 68% |
| Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: Q19AV8
Fln msg: Distance to subject end: 137 aas, your sequence is shorter than subject: 51 - 998
Fln protein:
H
Protein Length:
52
Fln nts:
T
Fln Alignment:
GDTE5QK01DDBIS___HDCEPSIVHRDVKSNNILLDEDYGAHVADFGLAKILQSCGMGADSMSAIAG
Q19AV8_______________HGCVPAIVHRDVKSNNILLDEDYVAHVADFGVAKILQSCARGADSMSAIAG
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
