SustainPineDB

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Assembly info
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SSRs
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GOs
ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene79997

Length: 225 nt

UniGene Fasta

>sp_v3.0_unigene79997
CCCGGCCGACCGATGTACCCGATTCTGGCATCATCTGCGATCTTTTGTGGTCGGATCCAGACAAGGATATCGAGGGCTGGGGGGAGAACGATCGCGGAGTTTCGTTCACGTTTGGTGGTGATGTGGTGGCCAAGTTCCTCAAGAAGCATGACCTTGACCTTGTTTGCCGCGCGCATCAGGTTGTGGAGGATGGCTACGAATTCTTTGCCAAGCGTCGCCTCGTGA

Ace file of the UniGene sp_v3.0_unigene79997

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Serine/threonine-protein phosphatase n=1 Tax=Lepeophtheirus salmonis RepID=C1BSR7_9MAXI	-	-	4.0e-35	87%
FL-Next	sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	83%
Sma3	Serine/threonine protein phosphatase	-	-	0.0	-

Source	ECs	Term	Type	e value	Identity
Sma3	Phosphoprotein phosphatase.	EC:3.1.3.16	-	0.0	-

Source	Gene names
Sma3	46C02.14; AT2G39840; At1g64040; At2g29400; At2g39840; At3g05580; At3g46820; At4g11240; At5g27840; At5g43380; At5g59160; B1051E10.26; B1144B06.13; CHLREDRAFT_160030; F16P2.22; F18C1.15; F22C12.20; F8L21.30; GSVIVT00002202001; GSVIVT00002529001; GSVIVT00020

Source	GOs	Term	Type	Identity
Sma3	nucleolus	GO:0005730	Cellular Component	-
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	phosphoprotein phosphatase activity	GO:0004721	Molecular Function	-
Sma3	protein serine/threonine phosphatase activity	GO:0004722	Molecular Function	-
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3	hydrolase activity	GO:0016787	Molecular Function	-
Sma3	manganese ion binding	GO:0030145	Molecular Function	-
Sma3	protein dephosphorylation	GO:0006470	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Ribosomal protein S16	IPR000307	-	-
Sma3	Metallophosphoesterase domain	IPR004843	-	-
Sma3	Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase	IPR006186	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT4G11240.1	TOPP7 Calcineurin-like metallo-phosphoesterase superfamily protein chr4:6847333-6849032 FORWARD LENGTH=322	9.99995e-41	79%
RefSeq	Arabidopsis thaliana	NP_176587.1	serine/threonine-protein phosphatase PP1 isozyme 3 [Arabidopsis thaliana]	9.99995e-41	79%
RefSeq	Populus trichocarpa	XP_002336375.1	predicted protein, partial [Populus trichocarpa]	4.00001e-41	79%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5AA89

Fln msg: Distance to subject end: 64 aas, your sequence is shorter than subject: 74 - 325

Fln protein: RPTDVPDSGIICDLLWSDPDKDIEGWGENDRGVSFTFGGDVVAKFLKKHDLDLVCRAHQVVEDGYEFFAKRRLV

Protein Length: 75

Fln nts: CCCGGCCGACCGATGTACCCGATTCTGGCATCATCTGCGATCTTTTGTGGTCGGATCCAGACAAGGATATCGAGGGCTGGGGGGAGAACGATCGCGGAGTTTCGTTCACGTTTGGTGGTGATGTGGTGGCCAAGTTCCTCAAGAAGCATGACCTTGACCTTGTTTGCCGCGCGCATCAGGTTGTGGAGGATGGCTACGAATTCTTTGCCAAGCGTCGCCTCGTGA

Fln Alignment:

GD4IA4404JEWFY___RPTDVPDSGIICDLLWSDPDKDIEGWGENDRGVSFTFGGDVVAKFLKKHDLDLVCRAHQVVEDGYEFFAKRRLV
D5AA89_______________RPTDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGPDKVTEFLQKHDLDLICRAHQVVEDGYEFFAKRQLV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain