UniGene Name: sp_v3.0_unigene79506
Length: 241 nt
This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense
UniGene Fasta (sense) |
---|
>sp_v3.0_unigene79506
A |
Ace file of the UniGene sp_v3.0_unigene79506 (antisense) |
---|
If you push the Download ace button, you will download an ace file of this UniGene.
To watch this ACE file you will need an ACE viewer program as Tablet:
Go to the Tablet ACE viewer Web
Annotations |
---|
Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | Phenylcoumaran benzylic ether reductase homolog TH6 n=4 Tax=Pinaceae RepID=Q9M523_TSUHE | - | - | 1.0e-20 | 84% |
FL-Next | tr=Phenylcoumaran benzylic ether reductase homolog TH6; Tsuga heterophylla (Western hemlock) (Abies heterophylla). | - | - | 0.0 | 84% |
Sma3 | Phenylcoumaran benzylic ether reductase 2 | - | - | 2.885e-08 | - |
Source | ECs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Oxidoreductases, Acting on the CH-CH group of donors, With NAD(+) or NADP(+) as acceptor. | EC:1.3.1.- | - | 1.902e-06 | - |
Source | KEGGs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Fatty acid biosynthesis | 00061 | 1.902e-06 | % | |
Sma3 | Phenylalanine metabolism | 00360 | 1.902e-06 | % | |
Sma3 | Chlorocyclohexane and chlorobenzene degradation | 00361 | 1.902e-06 | % | |
Sma3 | Fluorobenzoate degradation | 00364 | 1.902e-06 | % | |
Sma3 | Tryptophan metabolism | 00380 | 1.902e-06 | % | |
Sma3 | Xylene degradation | 00622 | 1.902e-06 | % | |
Sma3 | Toluene degradation | 00623 | 1.902e-06 | % | |
Sma3 | Polycyclic aromatic hydrocarbon degradation | 00624 | 1.902e-06 | % | |
Sma3 | Propanoate metabolism | 00640 | 1.902e-06 | % | |
Sma3 | Isoflavonoid biosynthesis | 00943 | 1.902e-06 | % | |
Sma3 | Biosynthesis of unsaturated fatty acids | 01040 | 1.902e-06 | % | |
Sma3 | Metabolic pathways | 01100 | 1.902e-06 | % |
Source | Gene names |
---|---|
Sma3 | A622; A622L; At1g75280; BETV6; BETV6.0102; DDCBER1; F22H5.17; GSVIVT00014594001; GSVIVT00036356001; GSVIVT00036358001; GSVIVT00036360001; GSVIVT00036361001; GSVIVT00036363001; IFR2; PCBER1; PCBER2; PCBER3; PCBER4; POPTRDRAFT_201272; POPTRDRAFT_557236; POP |
Source | GOs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | cytoplasm | GO:0005737 | Cellular Component | 0.0 | - |
Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
Sma3 | catalytic activity | GO:0003824 | Molecular Function | 0.0 | - |
Sma3 | binding | GO:0005488 | Molecular Function | 0.0 | - |
Sma3 | oxidoreductase activity | GO:0016491 | Molecular Function | 0.0 | - |
Sma3 | transcription repressor activity | GO:0016564 | Molecular Function | 0.0 | - |
Sma3 | regulation of nitrogen utilization | GO:0006808 | Biological Process | 0.0 | - |
Sma3 | response to oxidative stress | GO:0006979 | Biological Process | 0.0 | - |
Sma3 | response to cadmium ion | GO:0046686 | Biological Process | 0.0 | - |
Sma3 | oxidation-reduction process | GO:0055114 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Cecropin | IPR000875 | - | 0.0 | - |
Sma3 | NmrA-like | IPR008030 | - | 0.0 | - |
Sma3 | NAD(P)-binding domain | IPR016040 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
---|---|---|---|---|---|
ATG | Arabidoptis thaliana | AT1G19540.1 | NmrA-like negative transcriptional regulator family protein chr1:6765713-6767247 FORWARD LENGTH=310 | 2.0e-15 | 62% |
RefSeq | Arabidopsis thaliana | NP_173385.1 | NmrA-like negative transcriptional regulator-like protein [Arabidopsis thaliana] | 2.0e-15 | 62% |
RefSeq | Populus trichocarpa | XP_002330574.1 | phenylcoumaran benzylic ether reductase 4 [Populus trichocarpa] | 4.0e-15 | 60% |
Full-Lengther Next Prediction |
---|
Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: Q9M523
Fln msg: Distance to subject end: 176 aas, your sequence is shorter than subject: 79 - 307
Fln protein:
W
Protein Length:
80
Fln nts:
A
Fln Alignment:
GD4IA4404I9ZXJ___IYEGSVEDQASLLEAIKTVDVTISAVKGPQLMV*LNIIKAIKEVGTIKRFLPSEFGNDVDRTH
Q9M523_______________IVNGSLEDQASLVEAIKKVDVVISAVKGPQLGDQLNIIKAIKEIGTIKRFLPSEFGNDVDRTH
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain