UniGene Name: sp_v3.0_unigene79085
Length: 128 nt
UniGene Fasta |
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>sp_v3.0_unigene79085
A |
Ace file of the UniGene sp_v3.0_unigene79085 |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
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AutoFact | Os02g0632100 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q0DZC2_ORYSJ | - | - | 4.0e-08 | 66% |
FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 64% |
Source | Gene names |
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Sma3 | At1g18390; At3g53840; At5g01950; F15H18.11; F15H18.25; F4H5.8; F5K20_140; GSVIVT00000553001; GSVIVT00005293001; GSVIVT00010057001; GSVIVT00011185001; GSVIVT00013473001; GSVIVT00018412001; GSVIVT00023921001; LOC_Os10g10030; OSJNBa0047G15.20; OSJNBa0079H23. |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
Sma3 | chloroplast | GO:0009507 | Cellular Component | 0.0 | - |
Sma3 | integral to membrane | GO:0016021 | Cellular Component | 0.0 | - |
Sma3 | nucleic acid binding | GO:0003676 | Molecular Function | 0.0 | - |
Sma3 | peptidyl-prolyl cis-trans isomerase activity | GO:0003755 | Molecular Function | 0.0 | - |
Sma3 | protein serine/threonine kinase activity | GO:0004674 | Molecular Function | 0.0 | - |
Sma3 | protein tyrosine kinase activity | GO:0004713 | Molecular Function | 0.0 | - |
Sma3 | receptor activity | GO:0004872 | Molecular Function | 0.0 | - |
Sma3 | calcium ion binding | GO:0005509 | Molecular Function | 0.0 | - |
Sma3 | protein binding | GO:0005515 | Molecular Function | 0.0 | - |
Sma3 | ATP binding | GO:0005524 | Molecular Function | 0.0 | - |
Sma3 | protein folding | GO:0006457 | Biological Process | 0.0 | - |
Sma3 | protein phosphorylation | GO:0006468 | Biological Process | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT1G18390.2 | - | 2.0e-12 | 72% |
RefSeq | Arabidopsis thaliana | NP_173275.4 | protein kinase domain-containing protein [Arabidopsis thaliana] | 2.0e-12 | 72% |
RefSeq | Populus trichocarpa | XP_002327462.1 | predicted protein, partial [Populus trichocarpa] | 3.0e-11 | 64% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: B8LPC1
Fln msg: Distance to subject end: 165 aas, your sequence is shorter than subject: 42 - 611
Fln protein:
I
Protein Length:
43
Fln nts:
A
Fln Alignment:
GD4IA4404J2R0Q___IFHRDVKSSNILLDENFNVKVADFGLCRIVPVNASHV
B8LPC1_______________IIHRDIKASNILLDENFNARVADFGLAKFAPEGVSHL
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain