SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene77946

Length: 257 nt

UniGene Fasta

>sp_v3.0_unigene77946
AGCCAAGGGTTAATGTTGGAATCTATTTCAGAAAGGCTGTTGGAGTTTGGTGGACCCCATTACCGCTGTGTTGATAAAGTGCCACAGACTCGTGTTCAGATGATAGTTTCAGCAGGGGAGCAGAAAGTACCTTTCACATCTGGATTACTTATTGGGATTGGAGAAACAAGAGAAGAGCGACTGCAAAGTCTACTTTTACTTCGTTCATTACACCAACAATATGGTCACATACAAGAGCTCATAGTTCAAAATTTTCG

Ace file of the UniGene sp_v3.0_unigene77946

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Radical SAM domain protein (Fragment) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5G0_ACIDE	-	-	5.0e-19	58%
FL-Next	tr=Putative uncharacterized protein; Chlorella variabilis (Green alga).	-	-	0.0	61%

Source	Gene names
Sma3	CHLREDRAFT_107387; MICPUCDRAFT_60554; MICPUN_83126; OSTLU_51122; Ot12g01440; PHYPADRAFT_234559;

Source	GOs	Term	Type	Identity
Sma3	transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0016765	Molecular Function	-
Sma3	4 iron, 4 sulfur cluster binding	GO:0051539	Molecular Function	-
Sma3	cofactor biosynthetic process	GO:0051188	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	FO synthase, subunit 2-like	IPR005244	-	-
Sma3	Elongator protein 3/MiaB/NifB	IPR006638	-	-
Sma3	Radical SAM	IPR007197	-	-
Sma3	Aldolase-type TIM barrel	IPR013785	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: E1ZGJ0

Fln msg: Distance to subject end: 609 aas, your sequence is shorter than subject: 85 - 871

Fln protein: SQGLMLESISERLLEFGGPHYRCVDKVPQTRVQMIVSAGEQKVPFTSGLLIGIGETREERLQSLLLLRSLHQQYGHIQELIVQNF

Protein Length: 86

Fln nts: AGCCAAGGGTTAATGTTGGAATCTATTTCAGAAAGGCTGTTGGAGTTTGGTGGACCCCATTACCGCTGTGTTGATAAAGTGCCACAGACTCGTGTTCAGATGATAGTTTCAGCAGGGGAGCAGAAAGTACCTTTCACATCTGGATTACTTATTGGGATTGGAGAAACAAGAGAAGAGCGACTGCAAAGTCTACTTTTACTTCGTTCATTACACCAACAATATGGTCACATACAAGAGCTCATAGTTCAAAATTTTCG

Fln Alignment:

GD4IA4403G251U___SQGLMLESISERLLEFGGPHYRCVDKVPQTRVQMIVSAGEQKVPFTSGLLIGIGETXXXXXXXXXXXXXXXXXYGHIQELIVQNF
E1ZGJ0_______________SQGLMLESTSVALLQPGGAHHGCPDKEPAARLATLEAAGQEEVPFTTGILIGIGESRLDRIESLLHIRRLHQRYGHIQELIIQNF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain