SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene77710

Length: 133 nt

UniGene Fasta

>sp_v3.0_unigene77710
TGGTCTACATCGTGGAATGAACAATTCTCAACGCTTTTAGTCAGAACATTCAAACAACGCCAAAGTGATTATTTTAGCAAACTGAGGCTCGCACAGAACATTGGAGTCTCCCTGCTTTTGGGATTTCTCTGGT

Ace file of the UniGene sp_v3.0_unigene77710

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ABC-2 type transporter family protein [Arabidopsis thaliana] gb\|AEE75312.1\| ABC-2 type transporter family protein [Arabidopsis thaliana]	-	-	1.0e-07	54%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	47%

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G13220.1	WBC27, ABCG26 ABC-2 type transporter family protein chr3:4247968-4250703 REVERSE LENGTH=685	2.0e-11	54%
RefSeq	Arabidopsis thaliana	NP_187928.2	ABC-2 type transporter family protein [Arabidopsis thaliana]	2.0e-11	54%
RefSeq	Populus trichocarpa	XP_002300394.1	white-brown-complex ABC transporter family, partial [Populus trichocarpa]	3.0e-11	56%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LNF9

Fln msg: Distance to subject end: 232 aas, your sequence is shorter than subject: 44 - 819

Fln protein: WSTSWNEQFSTLLVRTFKQRQSDYFSKLRLAQNIGVSLLLGFLW

Protein Length: 45

Fln nts: TGGTCTACATCGTGGAATGAACAATTCTCAACGCTTTTAGTCAGAACATTCAAACAACGCCAAAGTGATTATTTTAGCAAACTGAGGCTCGCACAGAACATTGGAGTCTCCCTGCTTTTGGGATTTCTCTGGT

Fln Alignment:

GD4IA4403FSPWQ___WSTSWNEQFSTLLVRTFKQRQSDYFSKLRLAQNIGVSLLLGFLW
B8LNF9_______________WGATWWDQFSILFVRGLKERRHEYLSFLRIAQVFLTALILGLLW

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain