SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene75665

Length: 225 nt

UniGene Fasta

>sp_v3.0_unigene75665
TGCGTAACAGCTCATCTCCAAATTGTTGGAGGAGATCAATGGGACCCTGCATCCTTCAAACAAACAAAATTAGACAACAGCAGTATGTTCGCATGAAGAAATCACATTCAGGGAAGGTTGTTCCTGGGACAATGGACACCGCTATTGCCAAACATTTGGCACATGCATATGGTATTATGGCAGAAAAAGTTGCATCAATAGCACAGACTGAACATTTGGGGAAAA

Ace file of the UniGene sp_v3.0_unigene75665

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	glycerol-3-phosphate dehydrogenase SDP6 [Arabidopsis thaliana] sp\|Q9SS48.1\|SDP6_ARATH RecName: Full=Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial; AltName: Full=Protein SUGAR-DEPENDENT 6; Flags: Precursor gb\|AAF02807.1\|AC009400_3 putative glycero	-	-	7.0e-16	75%
FL-Next	sp=Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	75%

Source	Gene names
Sma3	At3g10370; F14P13.3; GSVIVT00018147001; POPTRDRAFT_822583; RCOM_0722140; SDP6; VITISV_023568;

Source	GOs	Term	Type	Identity
Sma3	mitochondrial inner membrane	GO:0005743	Cellular Component	-
Sma3	glycerol-3-phosphate dehydrogenase complex	GO:0009331	Cellular Component	-
Sma3	glycerol-3-phosphate dehydrogenase activity	GO:0004368	Molecular Function	-
Sma3	glycerol-3-phosphate metabolic process	GO:0006072	Biological Process	-
Sma3	glycerophosphate shuttle	GO:0006127	Biological Process	-
Sma3	glycerol catabolic process	GO:0019563	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	FAD-dependent glycerol-3-phosphate dehydrogenase	IPR000447	-	0.0	-
Sma3	FAD dependent oxidoreductase	IPR006076	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G10370.1	SDP6 FAD-dependent oxidoreductase family protein chr3:3216502-3219027 FORWARD LENGTH=629	4.0e-18	75%
RefSeq	Arabidopsis thaliana	NP_187648.1	glycerol-3-phosphate dehydrogenase SDP6 [Arabidopsis thaliana]	5.0e-18	75%
RefSeq	Populus trichocarpa	XP_002315321.1	predicted protein [Populus trichocarpa]	5.0e-17	71%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9SS48

Fln msg: Distance to subject end: 93 aas, your sequence is shorter than subject: 74 - 629

Fln protein: RNSSSPNCWRRSMGPCILQTNKIRQQQYVRMKKSHSGKVVPGTMDTAIAKHLAHAYGIMAEKVASIAQTEHLGK

Protein Length: 75

Fln nts: TGCGTAACAGCTCATCTCCAAATTGTTGGAGGAGATCAATGGGACCCTGCATCCTTCAAACAAACAAAATTAGACAACAGCAGTATGTTCGCATGAAGAAATCACATTCAGGGAAGGTTGTTCCTGGGACAATGGACACCGCTATTGCCAAACATTTGGCACATGCATATGGTATTATGGCAGAAAAAGTTGCATCAATAGCACAGACTGAACATTTGGGGAAAA

Fln Alignment:

GD4IA4402C9H4M___QQYVRMKKSHSGKVVPGTMDTAIAKHLAHAYGIMAEKVASIAQTEHLGK
Q9SS48_______________QQYVRMKKTYGGKVVPGAMDTAAAKHLSHAYGSMADRVATIAQEEGLGK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain