SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene73412

Length: 178 nt

UniGene Fasta

>sp_v3.0_unigene73412
CGTCGTGACCTTGGCTGTCACTCATCTGGACGATATAGGATGGGGCCTAGGATTTGGCATTCCTGCTGTGGCTATGGCAATAGCACTATTTATCTTCTTGTGTGGGACAAAATTGTACCGGCATAAACTTCCTGGTGGTAGCCCGCTTACTCGAATTGTCCATGTCTTTGTTGCAACA

Ace file of the UniGene sp_v3.0_unigene73412

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative peptide transport protein [Oryza sativa Japonica Group] gb\|EAZ38386.1\| hypothetical protein OsJ_22763 [Oryza sativa Japonica Group]	-	-	1.0e-11	66%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	77%
Sma3	Peptide transporter, putative	-	-	3.692e-07	-

Source	Gene names
Sma3	B1026C12.10; GSVIVT00021470001; GSVIVT00021471001; GSVIVT00024159001; OSJNBa0026L12.7; Os01g0142800; Os07g0100600; OsI_00345; OsI_24563; OsJ_00327; OsJ_22763; P0019D06.17-1; P0024G09.5-1; PHYPADRAFT_134814; POPTRDRAFT_576928; POPTRDRAFT_762471; POPTRDRAFT

Source	GOs	Term	Type	Identity
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	transporter activity	GO:0005215	Molecular Function	-
Sma3	oligopeptide transport	GO:0006857	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Oligopeptide transporter	IPR000109	-	0.0	-
Sma3	PTR2 family proton/oligopeptide symporter, conserved site	IPR018456	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G46040.1	Major facilitator superfamily protein chr5:18671397-18673551 REVERSE LENGTH=586	1.0e-14	49%
RefSeq	Arabidopsis thaliana	NP_199416.1	peptide transporter PTR3-B [Arabidopsis thaliana]	2.0e-14	49%
RefSeq	Populus trichocarpa	XP_002309120.1	predicted protein [Populus trichocarpa]	6.0e-16	65%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LQ03

Fln msg: Distance to subject end: 327 aas, your sequence is shorter than subject: 59 - 573

Fln protein: VVTLAVTHLDDIGWGLGFGIPAVAMAIALFIFLCGTKLYRHKLPGGSPLTRIVHVFVAT

Protein Length: 60

Fln nts: CGTCGTGACCTTGGCTGTCACTCATCTGGACGATATAGGATGGGGCCTAGGATTTGGCATTCCTGCTGTGGCTATGGCAATAGCACTATTTATCTTCTTGTGTGGGACAAAATTGTACCGGCATAAACTTCCTGGTGGTAGCCCGCTTACTCGAATTGTCCATGTCTTTGTTGCAACA

Fln Alignment:

GG46A6U02GP1GO___VTLAVTHLDDIGWGLGFGIPAVAMAIALFIFLCGTKLYRHKLPGGSPLTRIVHVFVAT
B8LQ03_______________VTVLLYIQDNVGWGLGFGIPAVTMAVALFIFLCGTRFYRHKLPGGSPLTRIIHVFVAT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain