SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene73410

Length: 152 nt

UniGene Fasta

>sp_v3.0_unigene73410
CGTCGTGACCTTGGCTGTCACTCATATTGAGTATGGTCTTGAGGAGAATGCAGAATTGCTGGTTGCTTCCTGCCTACAGTTTTTTCTCAGGGATCTTCCAAGGTCTTTACACCATCCACAGGTTGCAAGCTTATTATGTAAACCGGAAGGCA

Ace file of the UniGene sp_v3.0_unigene73410

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	RecName: Full=Ethylene-overproduction protein 1; AltName: Full=Protein ETHYLENE OVERPRODUCER 1; Short=Protein ETO1 gb\|AAT01656.1\| ethylene overproducer 1 [Arabidopsis thaliana]	-	-	4.0e-08	60%
FL-Next	sp=Ethylene-overproduction protein 1; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	60%

Source	Gene names
Sma3	POPTRDRAFT_416860;

Source	InterPros	Term	Type	Identity
Sma3	BTB/POZ-like	IPR000210	-	-
Sma3	Tetratricopeptide TPR-1	IPR001440	-	-
Sma3	BTB/POZ fold	IPR011333	-	-
Sma3	Tetratricopeptide-like helical	IPR011990	-	-
Sma3	Tetratricopeptide TPR2	IPR013105	-	-
Sma3	Tetratricopeptide repeat	IPR019734	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G51770.2	ETO1 tetratricopeptide repeat (TPR)-containing protein chr3:19200328-19203998 REVERSE LENGTH=959	5.0e-12	60%
RefSeq	Arabidopsis thaliana	NP_190745.6	tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana]	7.0e-12	60%
RefSeq	Populus trichocarpa	XP_002309154.1	predicted protein, partial [Populus trichocarpa]	6.0e-12	65%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: O65020

Fln msg: Distance to subject end: 558 aas, your sequence is shorter than subject: 50 - 951

Fln protein: VVTLAVTHIEYGLEENAELLVASCLQFFLRDLPRSLHHPQVASLLCKPEG

Protein Length: 51

Fln nts: CGTCGTGACCTTGGCTGTCACTCATATTGAGTATGGTCTTGAGGAGAATGCAGAATTGCTGGTTGCTTCCTGCCTACAGTTTTTTCTCAGGGATCTTCCAAGGTCTTTACACCATCCACAGGTTGCAAGCTTATTATGTAAACCGGAAGGCA

Fln Alignment:

GG46A6U02F02W3___AVTHIEYGLEENAELLVASCLQFFLRDLPRSLHHPQVASLLCKPEG
O65020_______________AMLLIEYGLEEAAYLLVAACLQVFLRELPSSMHNPNVIKIFCSAEG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain