SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene73255

Length: 194 nt

UniGene Fasta

>sp_v3.0_unigene73255
CGTCGTGACCTTGGCTGTCACTCATCATGGTTGGTGCACAAGAAAGAAACTTCGTGGAGACTGAAACGACTTGAGCAGCAGCTTGAAGCTGAGAAAGCTCGTAAGCGCCGAGAAAAAATGGAGGAAATAGAATTCAAAGTACGAGCTCTGAGAGAAGAAGAAAGTTTGTATTTGGATAGATTGGAGACTGATTA

Ace file of the UniGene sp_v3.0_unigene73255

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Myb family transcription factor n=1 Tax=Castanea mollissima RepID=D1LXI9_9ROSI	-	-	8.0e-06	43%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	73%
Sma3	Phantastica transcription factor	-	-	1.859e-15	-

Source	Gene names
Sma3	GSVIVT00021322001; GSVIVT00038174001; MAPHAN1; MYB091; MYB154; MYB224; PHAN; PHAN1; PHANa; POPTRDRAFT_556142; POPTRDRAFT_580774; POPTRDRAFT_652976; Phan; RCOM_1568280; VITISV_034844; phan;

Source	GOs	Term	Type	Identity
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	DNA binding	GO:0003677	Molecular Function	-
Sma3		GO:0045449	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	SANT/Myb domain	IPR001005	-	-
Sma3		IPR012287	-	-
Sma3		IPR014778	-	-
Sma3	Myb transcription factor	IPR015495	-	-
Sma3	Myb domain, DNA-binding	IPR017930	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5ABT4

Fln msg: Distance to subject end: 52 aas, your sequence is shorter than subject: 64 - 382

Fln protein: RRDLGCHSSWLVHKKETSWRLKRLEQQLEAEKARKRREKMEEIEFKVRALREEESLYLDRLETD

Protein Length: 65

Fln nts: CGTCGTGACCTTGGCTGTCACTCATCATGGTTGGTGCACAAGAAAGAAACTTCGTGGAGACTGAAACGACTTGAGCAGCAGCTTGAAGCTGAGAAAGCTCGTAAGCGCCGAGAAAAAATGGAGGAAATAGAATTCAAAGTACGAGCTCTGAGAGAAGAAGAAAGTTTGTATTTGGATAGATTGGAGACTGATTA

Fln Alignment:

GG46A6U02FQB4Y___SWLVHKKETSWRLKRLEQQLXXXXXXXXXXXXXXXXFKVRALREEESLYLDRLETD
D5ABT4_______________SWFMHKKEATWRLSRLEQQLESEKARKRREKIEEVGSKIRALREEEITYLDKLETE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain