SustainPineDB

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Assembly info
Unigenes
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SSRs
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene73055

Length: 144 nt

UniGene Fasta

>sp_v3.0_unigene73055
CGTCGTGACCTTGGCTGTCACTCAATGGGGCAACTAGGAGCTGGTTTGGAAGTATTGCATGCGCATCATGTGATTCATAGGGACTTGAAACCAGAGAATCTTCTTCTTTCTACACATAAGGATGATGCTGTGTTGAAGATAGCA

Ace file of the UniGene sp_v3.0_unigene73055

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Serine/threonine-protein kinase, putative n=1 Tax=Ricinus communis RepID=B9T0M6_RICCO	-	-	3.0e-09	75%
FL-Next	sp=Cell division control protein 2 homolog C; Antirrhinum majus (Garden snapdragon).	-	-	0.0	63%

Source	Gene names
Sma3	At2g37840; At3g53930; At3g53930/F5K20_230; GSVIVT00034887001; PHYPADRAFT_10974; RCOM_0575620;

Source	GOs	Term	Type	Identity
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Pyridoxal phosphate-dependent decarboxylase	IPR002129	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G49180.1	protein kinase family protein chr1:18184840-18187444 REVERSE LENGTH=408	1.0e-12	58%
RefSeq	Arabidopsis thaliana	NP_001185178.1	protein kinase-like protein [Arabidopsis thaliana]	2.0e-12	58%
RefSeq	Populus trichocarpa	XP_002309098.1	predicted protein [Populus trichocarpa]	9.0e-11	64%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q38774

Fln msg: Distance to subject end: 149 aas, your sequence is shorter than subject: 48 - 305

Fln protein: RRDLGCHSMGQLGAGLEVLHAHHVIHRDLKPENLLLSTHKDDAVLKIA

Protein Length: 49

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATGGGGCAACTAGGAGCTGGTTTGGAAGTATTGCATGCGCATCATGTGATTCATAGGGACTTGAAACCAGAGAATCTTCTTCTTTCTACACATAAGGATGATGCTGTGTTGAAGATAGCA

Fln Alignment:

GG46A6U02FQRXU___QLGAGLEVLHAHHVIHRDLKPENLLLSTHKDDAVLKIA
Q38774_______________QLCKGVSHCHAHGVLHRDLKPQNLLLD--KDKGVLKIA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain