SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene72829

Length: 149 nt

UniGene Fasta

>sp_v3.0_unigene72829
CGTCGTGACCTTGGCTGTCACTCATTATTCGGGACTGTGGATAGCTGGATGATTTGGAATTTAACTGGGGGCATTAAAGGAATTAGGAAAGATGGAACAGAGTTAAGGGCAGTCATGTCACCGATTGTTCAAATGCAGCGCGCACCATG

Ace file of the UniGene sp_v3.0_unigene72829

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Os04g0647800 protein n=3 Tax=Oryza sativa RepID=Q0J9K2_ORYSJ	-	-	6.0e-08	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	79%

Source	GOs	Term	Type	Identity
Sma3	glycerol kinase activity	GO:0004370	Molecular Function	-
Sma3	carbohydrate metabolic process	GO:0005975	Biological Process	-
Sma3	glycerol-3-phosphate metabolic process	GO:0006072	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Carbohydrate kinase, FGGY	IPR000577	-	-
Sma3	Glycerol kinase	IPR005999	-	-
Sma3	Carbohydrate kinase, FGGY, N-terminal	IPR018484	-	-
Sma3	Carbohydrate kinase, FGGY, C-terminal	IPR018485	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NYG2

Fln msg: Overlapping hits, possible frame ERROR between 108 and 99, Distance to subject end: 320 aas, your sequence is shorter than subject: 50 - 530

Fln protein: RRDLGCHSLFGTVDSWMIWNLTGGIKGIRKDGxxxxxSHVTDCSNAARTM

Protein Length: 51

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTATTCGGGACTGTGGATAGCTGGATGATTTGGAATTTAACTGGGGGCATTAAAGGAATTAGGAAAGATGGAxxxxxxxxxxxxxxxAGTCATGTCACCGATTGTTCAAATGCAGCGCGCACCATG

Fln Alignment:

GG46A6U02H6FI0___SLFGTVDSWMIWNLTGGIKGIRKDGTxxxGSHVTDCSNAARTM
A9NYG2_______________ALFGTVDSWLIWNLTGGIKGSRKDGTxxxGSHVTDCSNAARTM

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain