SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene72746

Length: 123 nt

UniGene Fasta

>sp_v3.0_unigene72746
CGTCGTGACCTTGGCTGTCACTCATGTGCTTTGGTGCTCAGTGGCCGGTATTATTCGCTGTCATCTCGGAGCTATTTGGTCTCAAGTATTATGCTACACTCTATAATCTTGGAGGAGTTGCGA

Ace file of the UniGene sp_v3.0_unigene72746

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Nitrate and chloride transporter n=1 Tax=Zea mays RepID=B6U7W3_MAIZE	-	-	3.0e-09	81%
FL-Next	tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida).	-	-	0.0	87%
Sma3	Putative nodule-specific protein	-	-	1.426e-09	-

Source	Gene names
Sma3	At2g39210; GSVIVT00000612001; GSVIVT00018121001; GSVIVT00018122001; GSVIVT00018125001; LOC_Os03g47810; LOC_Os03g58580; LOC_Os12g29950; OSJNBa0052F07.13; OSJNBb0002L09.1; OSJNBb0070O09.5; OSJNBb0084L07.13; Os03g0800000; Os12g0484600; OsI_13040; OsI_13924;

Source	InterPros	Term	Type	Identity
Sma3	Sugar transporter, conserved site	IPR005829	-	-
Sma3	Nodulin-like	IPR010658	-	-
Sma3	Major facilitator superfamily	IPR011701	-	-
Sma3	Glycoside hydrolase, family 5, conserved site	IPR018087	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G39210.1	Major facilitator superfamily protein chr2:16366287-16368231 REVERSE LENGTH=601	2.0e-13	81%
RefSeq	Arabidopsis thaliana	NP_181454.1	major facilitator protein [Arabidopsis thaliana]	2.0e-13	81%
RefSeq	Populus trichocarpa	XP_002326206.1	predicted protein, partial [Populus trichocarpa]	1.0e-12	75%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: I1LEZ1

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 107 aas, your sequence is shorter than subject: 40 - 586

Fln protein: S*PWLSLMCFGAQWPVLFAVISELFGLKYYATLYNLGGVA

Protein Length: 41

Fln nts: CGTCGTGACCTTGGCTGTCACTCATGTGCTTTGGTGCTCAGTGGCCGGTATTATTCGCTGTCATCTCGGAGCTATTTGGTCTCAAGTATTATGCTACACTCTATAATCTTGGAGGAGTTGCGA

Fln Alignment:

GG46A6U02F8ED0___CFGAQWPVLFAVISELFGLKYYATLYNLGGVA
I1LEZ1_______________CFGAQWPLLFAIISELFGLKYYATLYNFGSVA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain