|
||||||
|
UniGene Name: sp_v3.0_unigene71477
Length: 240 nt
 UniGene Fasta
|
|---|
| >sp_v3.0_unigene71477
C |
|
Ace file of the UniGene sp_v3.0_unigene71477
|
|---|
If you push the Download ace button, you will download an ace file of this UniGene.
To watch this ACE file you will need an ACE viewer program as Tablet:
Go to the Tablet ACE viewer Web
| Annotations |
|---|
| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | Putative sinapyl alcohol dehydrogenase (Fragment) n=2 Tax=Pinus RepID=E5F5N9_PINAR | - | - | 3.0e-32 | 93% |
| FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 88% |
| Sma3 | Cinnamyl alcohol dehydrogenase | - | - | 0.0 | - |
| Source | ECs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Cinnamyl-alcohol dehydrogenase. | EC:1.1.1.195 | - | 2.83763e-42 | - |
| Source | KEGGs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Phenylpropanoid biosynthesis | 00940 | 2.83763e-42 | % | |
| Sma3 | Biosynthesis of phenylpropanoids | 01061 | 2.83763e-42 | % | |
| Sma3 | Metabolic pathways | 01100 | 2.83763e-42 | % | |
| Sma3 | Biosynthesis of secondary metabolites | 01110 | 2.83763e-42 | % | |
| Sma3 | Mannitol dehydrogenase. | EC:1.1.1.255 | - | 0.0 | - |
| Source | Gene names |
|---|---|
| Sma3 | AT2G21730; AT2G21890; AT4G37970; AT4G37980; AT4G39330; AT4g37970; At1g72680; At2g21730; At2g21890; At4g37970; At4g37980; At4g37990; At4g39330; AtCAD1; BM1; CAD; CAD1; CAD14; CAD19; CAD2; CAD3; CAD6; CAD7; CAD8; CADL1; CADL10; CADL11; CADL2; CADL3; CADL4; |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | cytoplasm | GO:0005737 | Cellular Component | 0.0 | - |
| Sma3 | apoplast | GO:0048046 | Cellular Component | 0.0 | - |
| Sma3 | protein binding | GO:0005515 | Molecular Function | 0.0 | - |
| Sma3 | zinc ion binding | GO:0008270 | Molecular Function | 0.0 | - |
| Sma3 | oxidoreductase activity | GO:0016491 | Molecular Function | 0.0 | - |
| Sma3 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | GO:0016616 | Molecular Function | 0.0 | - |
| Sma3 | cinnamyl-alcohol dehydrogenase activity | GO:0045551 | Molecular Function | 0.0 | - |
| Sma3 | mannitol dehydrogenase activity | GO:0046029 | Molecular Function | 0.0 | - |
| Sma3 | cofactor binding | GO:0048037 | Molecular Function | 0.0 | - |
| Sma3 | response to bacterium | GO:0009617 | Biological Process | 0.0 | - |
| Sma3 | lignin biosynthetic process | GO:0009809 | Biological Process | 0.0 | - |
| Sma3 | oxidation-reduction process | GO:0055114 | Biological Process | 0.0 | - |
| Source | InterPros | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Sma3 | Alcohol dehydrogenase superfamily, zinc-type | IPR002085 | - | 0.0 | - |
| Sma3 | Alcohol dehydrogenase, zinc-type, conserved site | IPR002328 | - | 0.0 | - |
| Sma3 | Sugar transporter, conserved site | IPR005829 | - | 0.0 | - |
| Sma3 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding | IPR006140 | - | 0.0 | - |
| Sma3 | TonB box, conserved site | IPR010916 | - | 0.0 | - |
| Sma3 | Alcohol dehydrogenase, C-terminal | IPR013149 | - | 0.0 | - |
| Sma3 | Alcohol dehydrogenase GroES-like | IPR013154 | - | 0.0 | - |
| Sma3 | NAD(P)-binding domain | IPR016040 | - | 0.0 | - |
| Sma3 | 4Fe-4S ferredoxin, iron-sulphur binding, conserved site | IPR017900 | - | 0.0 | - |
| Source | Species | ID | Description | e value | Identity |
|---|---|---|---|---|---|
| ATG | Arabidoptis thaliana | AT2G21730.1 | CAD2, ATCAD2 cinnamyl alcohol dehydrogenase homolog 2 chr2:9280054-9281623 FORWARD LENGTH=376 | 3.0e-25 | 61% |
| RefSeq | Arabidopsis thaliana | NP_179765.1 | cinnamyl alcohol dehydrogenase 2 [Arabidopsis thaliana] | 4.0e-25 | 61% |
| RefSeq | Populus trichocarpa | XP_002336182.1 | cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] | 3.0e-25 | 63% |
| Full-Lengther Next Prediction |
|---|
Fln status: Putative N-terminus
Fln database: coniferopsida.fasta
Fln subject: A9NQK7
Fln msg: Distance to subject end: 89 aas, W2: There is no M at the beginning, your sequence is shorter than subject: 79 - 166
Fln protein:
V
Protein Length:
80
Fln nts:
C
Fln Alignment:
GG46A6U02GO9V6___LAVKFGKAFGLKVTVISTSPKKEKEAREVLGADHFLISKDEKQMLDAARSLDYIIDTVAADHPLVPLISLLKVNGK
A9NQK7_______________MAVKFGKAFGLKVTVISTSPKKEKEAREDLGADNFLVSKDEKQMQDAAKSLDYIIDTVSADHPLLPLLSLLKVNGK
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
