SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene71383

Length: 187 nt

UniGene Fasta

>sp_v3.0_unigene71383
CGTCGTGACCTTGGCTGTCACTCATGCAAAAACCTAGAGGATCTTCCTCCAAAGAAAGAGCTGAATCCCTTAGACAACCACATATCATTTCAGTGTGAAGACATGCACGTTGTAGAGAAGAAACTGAAAAAGAGGAATATAAAGTATCTAAGACGTACAGTGGAGGAAGGAAGAGAAAGGATAGATC

Ace file of the UniGene sp_v3.0_unigene71383

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Lactoylglutathione lyase, putative n=1 Tax=Ricinus communis RepID=B9RV37_RICCO	-	-	5.0e-11	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	52%

Source	Gene names
Sma3	RCOM_0898830;

Source	InterPros	Term	Type	e value	Identity
Sma3	Glyoxalase/fosfomycin resistance/dioxygenase	IPR004360	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G80160.1	Lactoylglutathione lyase / glyoxalase I family protein chr1:30151101-30151930 FORWARD LENGTH=167	3.0e-14	60%
RefSeq	Arabidopsis thaliana	NP_001077851.1	lactoylglutathione lyase / glyoxalase I-like protein [Arabidopsis thaliana]	3.0e-14	60%
RefSeq	Populus trichocarpa	XP_002298106.1	predicted protein [Populus trichocarpa]	3.0e-14	50%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LNA7

Fln msg: Distance to subject end: 80 aas, your sequence is shorter than subject: 62 - 204

Fln protein: RRDLGCHSCKNLEDLPPKKELNPLDNHISFQCEDMHVVEKKLKKRNIKYLRRTVEEGRERID

Protein Length: 63

Fln nts: CGTCGTGACCTTGGCTGTCACTCATGCAAAAACCTAGAGGATCTTCCTCCAAAGAAAGAGCTGAATCCCTTAGACAACCACATATCATTTCAGTGTGAAGACATGCACGTTGTAGAGAAGAAACTGAAAAAGAGGAATATAAAGTATCTAAGACGTACAGTGGAGGAAGGAAGAGAAAGGATAGATC

Fln Alignment:

GG46A6U02I3SNC___LGCH--SCKNLEDLPPKKELNPLDNHISFQCEDMHVVEKKLKKRNIKYLRRTVEEGRERID
B8LNA7_______________IGIHLLQSKDPDSLPKKTEINPRDNHISFQCEDVQVVERKLQEMNVKYVKRIVEDGGIYVD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain