SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene69572

Length: 142 nt

UniGene Fasta

>sp_v3.0_unigene69572
CGTCGTGACCTTGGCTGTCACTCATTTTATCTGATGTGCTGCCTGATAGACCTGTAACTGAATCAGATGACCAGTCTGCACTTGTTTATCTTATGATCAAAGAGAAGAAGAAATGGGGAGGTAAGATTTATATTGAGAATGA

Ace file of the UniGene sp_v3.0_unigene69572

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	xyloglucan 6-xylosyltransferase [Arabidopsis thaliana] ref\|NP_001030917.1\| xyloglucan 6-xylosyltransferase [Arabidopsis thaliana] sp\|Q9LZJ3.1\|XT1_ARATH RecName: Full=Xyloglucan 6-xylosyltransferase; Short=AtXT1 gb\|AAL11581.1\|AF424587_1 AT3g62720/F26K9_150	-	-	2.0e-06	56%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	89%

Source	GOs	Term	Type	e value	Identity
Sma3	integral to membrane	GO:0016021	Cellular Component	0.0	-
Sma3	transferase activity, transferring hexosyl groups	GO:0016758	Molecular Function	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Galactosyl transferase	IPR008630	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NWS4

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 124 aas, your sequence is shorter than subject: 46 - 479

Fln protein: S*PWLSLILSDVLPDRPVTESDDQSALVYLMIKEKKKWGGKIYIEN

Protein Length: 47

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTTTATCTGATGTGCTGCCTGATAGACCTGTAACTGAATCAGATGACCAGTCTGCACTTGTTTATCTTATGATCAAAGAGAAGAAGAAATGGGGAGGTAAGATTTATATTGAGAATGA

Fln Alignment:

GG46A6U01CD5A5___ILSDVLPDRPVTESDDQSALVYLMIKEKKKWGGKIYIEN
A9NWS4_______________ILSDVLPDRALTESDDQSALIYLMIKEKKKWAGKIYIEN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain