SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene68571

Length: 203 nt

UniGene Fasta

>sp_v3.0_unigene68571
CGTCGTGACCTTGGCTGTCACTCAACGTTGGAAGTTCAACCTGGGAAACAAGTAAGGACATGGCAGATCTTGTGGTTGGCAACTTGGAGGCTTACTATTCAAAGAAACCATTGTTAACACCTGTCGAATGAAGAAAATGTCGTTATAAAAATGGTTTTGATGATATAGTTTTTCTTTCCAATTCATATAACTCAGCGCATTTA

Ace file of the UniGene sp_v3.0_unigene68571

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Predicted protein; subsp. trichocarpa).	-	-	0.0	73%

Source	Gene names
Sma3	GSVIVT00034381001; POPTRDRAFT_813719; VITISV_025327;

Source	GOs	Term	Type	Identity
Sma3	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	GO:0016616	Molecular Function	-
Sma3	NAD binding	GO:0051287	Molecular Function	-
Sma3	metabolic process	GO:0008152	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain	IPR006139	-	-
Sma3	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding	IPR006140	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: tr_plants

Fln subject: B9GXB2

Fln msg: Unexpected stop codon in the beginning of your sequence, your sequence is shorter than subject: 43 - 314

Fln protein: S*PWLSLNVGSSTWETSKDMADLVVGNLEAYYSKKPLLTPVE*

Protein Length: 44

Fln nts: CGTCGTGACCTTGGCTGTCACTCAACGTTGGAAGTTCAACCTGGGAAACAAGTAAGGACATGGCAGATCTTGTGGTTGGCAACTTGGAGGCTTACTATTCAAAGAAACCATTGTTAACACCTGTCGAATGA___AGAAAATGTCGTTATAAAAATGGTTTTGATGATATAGTTTTTCTTTCCAATTCATATAACTCAGCGCATTTA

Fln Alignment:

GG46A6U01EUBN3___NVGSSTWETSKDMADLVVGNLEAYYSKKPLLTPV
B9GXB2_______________HVGSGTMETRKEMADLVVGNLEAHFLNKPLLTPV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain